Related papers: Study of fragmentation using clusterization algori…
In first-principles design of solid solutions and disordered materials, exhaustive evaluation of all possible substitutional configurations is often impractical because the number of site occupations increases exponentially. Here, we…
This paper discusses a deterministic clustering approach to capacitated resource allocation problems. In particular, the Deterministic Annealing (DA) algorithm from the data-compression literature, which bears a distinct analogy to the…
The ground state energy of ideal alpha-matter at T=0 is analyzed within the framework of variational theory of Bose quantum liquids. Calculations are done for three local alpha-alpha potentials with positive volume integrals and two-body…
We propose a framework for Semi-Supervised Active Clustering framework (SSAC), where the learner is allowed to interact with a domain expert, asking whether two given instances belong to the same cluster or not. We study the query and…
The fragmentation of multiply charged atomic sodium clusters of mass 200 is investigated using the Micro-canonical Metropolis Monte Carlo (MMMC) statistical technique for excitation energies up to 200 eV and for cluster charges up to $+9e$.…
Protein characterization is one of the key components for understanding the human body and advancing drug discovery processes. While the future of quantum hardware holds the potential to accurately characterize these molecules, current…
As one of the most robust global optimization methods, simulated annealing has received considerable attention, with many variations that attempt to improve the cooling schedule. This paper introduces a variant of simulated annealing that…
A puzzle has long existed for the $\alpha$-cluster content in the near-threshold 7.54 MeV state of $^{10}$Be. A new measurement was conducted to measure the cluster-decay partial width of this state, using the reaction $\rm{^9Be}(\rm{^9Be},…
Recent studies of clustering in light nuclei with an initial energy above 1 A GeV in nuclear treack emulsion are overviewed. The results of investigations of the relativistic $^9$Be nuclei fragmentation in emulsion, which entails the…
Using the stabilized jellium model with self-compression, we have calculated the dissociation energies and the barrier heights for the binary fragmentation of charged silver clusters. At each step of calculations, we have used the…
Many partitioning methods may be used to partition a network into smaller clusters while minimizing the number of cuts needed. However, other considerations must also be taken into account when a network represents a real system such as a…
Motivated by aggregation phenomena in gliding bacteria, we study collective motion in a twodimensional model of active, self-propelled rods interacting through volume exclusion. In simulations with individual particles, we find that…
Simulated annealing (SA) is a kind of relaxation method for finding equilibria of Hamiltonian systems. A set of evolution equations is solved with SA, which is derived from the original Hamiltonian system so that the energy of the system…
We have analyzed the atomic rearrangements underlying self-diffusion in amorphous Si during annealing using tight-binding molecular dynamics simulations. Two types of amorphous samples with different structural features were used to analyze…
We calculate ground-state properties of a many-quark system in the string-flip model using variational Monte Carlo methods. The many-body potential energy of the system is determined by finding the optimal grouping of quarks into hadrons.…
An approach for explicit consideration of cluster effects in nuclear systems and accurate ab initio calculations of cluster characteristics of nuclei is devised. The essential block of the approach is a construction of a basis which…
Simulated annealing (SA) was inspired from annealing in metallurgy, a technique involving heating and controlled cooling of a material to increase the size of its crystals and reduce their defects, both are attributes of the material that…
Using the stabilized jellium model in two schemes of `relaxed' and `rigid', we have calculated the dissociation energies and the fission barrier heights for the binary fragmentations of singly-ionized and doubly-ionized Ag clusters. In the…
This study introduces Skewed Fully Asynchronous Cellular Automata (SACA), a novel update scheme in cellular automata that updates the states of only two consecutive and adjacent cells, such as ci and ci+1, simultaneously at each time step.…
A global optimization method, conformational space annealing (CSA), is applied to study a 46-residue protein with the sequence B_9N_3(LB)_4N_3B_9N_3(LB)_5L, where B, L and N designate hydrophobic, hydrophilic, and neutral residues,…