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Synthetic molecular dynamics (synMD) trajectories from learned generative models have been proposed as a useful addition to the biomolecular simulation toolbox. The computational expense of explicitly integrating the equations of motion in…

Computational Physics · Physics 2022-05-05 John D. Russo , Daniel M. Zuckerman

We present a data-driven method for separating complex, multiscale systems into their constituent time-scale components using a recursive implementation of dynamic mode decomposition (DMD). Local linear models are built from windowed…

Systems and Control · Computer Science 2019-06-26 Daniel Dylewsky , Molei Tao , J. Nathan Kutz

A data-driven and equation-free approach is proposed and discussed to model ships maneuvers in waves, based on the dynamic mode decomposition (DMD). DMD is a dimensionality-reduction/reduced-order modeling method, which provides a linear…

Dynamical Systems · Mathematics 2021-05-28 Matteo Diez , Andea Serani , Emilio F. Campana , Frederick Stern

We present a reduced order modeling (ROM) technique for subsurface multi-phase flow problems building on the recently introduced deep residual recurrent neural network (DR-RNN) [1]. DR-RNN is a physics aware recurrent neural network for…

Computational Engineering, Finance, and Science · Computer Science 2018-10-25 J. Nagoor Kani , Ahmed H. Elsheikh

Large deep learning models such as BERT and ResNet achieve state-of-the-art performance but are costly to deploy at the edge due to their size and compute demands. We present RMT-KD, a compression method that leverages Random Matrix Theory…

Machine Learning · Computer Science 2026-02-09 Davide Ettori , Nastaran Darabi , Sureshkumar Senthilkumar , Amit Ranjan Trivedi

We describe a framework that can integrate prior physical information, e.g., the presence of kinematic constraints, to support data-driven simulation in multi-body dynamics. Unlike other approaches, e.g., Fully-connected Neural Network…

Computational Engineering, Finance, and Science · Computer Science 2024-07-12 Jingquan Wang , Shu Wang , Huzaifa Mustafa Unjhawala , Jinlong Wu , Dan Negrut

Offline Reinforcement Learning (RL) offers an attractive alternative to interactive data acquisition by leveraging pre-existing datasets. However, its effectiveness hinges on the quantity and quality of the data samples. This work explores…

Machine Learning · Computer Science 2024-10-17 Wen Zheng Terence Ng , Jianda Chen , Tianwei Zhang

Residual Dynamic Mode Decomposition (ResDMD) offers a method for accurately computing the spectral properties of Koopman operators. It achieves this by calculating an infinite-dimensional residual from snapshot data, thus overcoming issues…

Dynamical Systems · Mathematics 2024-03-12 Matthew J. Colbrook

We consider a Markov process in continuous time with a finite number of discrete states. The time-dependent probabilities of being in any state of the Markov chain are governed by a set of ordinary differential equations, whose dimension…

Optimization and Control · Mathematics 2014-10-31 Fernando Lopez-Caamal , Tatiana T. Marquez-Lago

Characterization and modeling of path-dependent behaviors of complex materials by phenomenological models remains challenging due to difficulties in formulating mathematical expressions and internal state variables (ISVs) governing…

Numerical Analysis · Mathematics 2022-08-23 Xiaolong He , Jiun-Shyan Chen

This paper is concerned with a data-driven technique for constructing finite Markov decision processes (MDPs) as finite abstractions of discrete-time stochastic control systems with unknown dynamics while providing formal closeness…

Systems and Control · Electrical Eng. & Systems 2022-06-30 Abolfazl Lavaei , Sadegh Soudjani , Emilio Frazzoli , Majid Zamani

Orthogonal time frequency space (OTFS) is a promising modulation scheme for wireless communication in high-mobility scenarios. Recently, a reservoir computing (RC) based approach has been introduced for online subframe-based symbol…

Signal Processing · Electrical Eng. & Systems 2024-01-26 Jiarui Xu , Karim Said , Lizhong Zheng , Lingjia Liu

Network reconstruction, i.e., obtaining network structure from data, is a central theme in systems biology, economics and engineering. In some previous work, we introduced dynamical structure functions as a tool for posing and solving the…

Systems and Control · Computer Science 2012-09-19 Ye Yuan , Guy-Bart Stan , Sean Warnick , Jorge Goncalves

We present two methods for reducing multidimensional information to one dimension for ease of understand or analysis while maintaining statistical power. While not new, dimensional reduction is not greatly used in high-energy physics and…

Data Analysis, Statistics and Probability · Physics 2015-05-14 Mario Campanelli , William Murray

3D reconstruction from a single view image is a long-standing prob-lem in computer vision. Various methods based on different shape representations(such as point cloud or volumetric representations) have been proposed. However,the 3D shape…

Graphics · Computer Science 2020-03-10 Aihua Mao , Canglan Dai , Lin Gao , Ying He , Yong-jin Liu

While Koopman-based techniques like extended Dynamic Mode Decomposition are nowadays ubiquitous in the data-driven approximation of dynamical systems, quantitative error estimates were only recently established. To this end, both sources of…

Optimization and Control · Mathematics 2022-11-15 Manuel Schaller , Karl Worthmann , Friedrich Philipp , Sebastian Peitz , Feliks Nüske

When solving the time-dependent radiative transport equation (RTE), implicit time discretization is often employed for its robustness and stability. This results in a sequence of steady-state RTEs with identical cross-sections but varying…

Numerical Analysis · Mathematics 2026-04-24 Qinchen Song , Lei Zhang , Min Tang

Molecular dynamics (MD) simulations are powerful tools for elucidating the macroscopic physical properties of materials from microscopic atomic behaviors. However, the massive, high-dimensional datasets generated by MD simulations pose a…

Applications · Statistics 2026-03-19 Yusuke Ono , Takumi Sato , Kenji Yasuoka , Linyu Peng

Extracting molecular properties from a wave function can be done through the linear response (LR) formalism or, equivalently, the equation of motion (EOM) formalism. For a simple model system, He in a 6-31G basis, it is here shown that…

Optimal transport has been very successful for various machine learning tasks; however, it is known to suffer from the curse of dimensionality. Hence, dimensionality reduction is desirable when applied to high-dimensional data with…

Machine Learning · Statistics 2025-07-21 Jie Wang , March Boedihardjo , Yao Xie
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