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This paper considers the problem of defining distributions over graphical structures. We propose an extension of the hyper Markov properties of Dawid and Lauritzen [Ann. Statist. 21 (1993) 1272-1317], which we term structural Markov…

Statistics Theory · Mathematics 2020-04-28 Simon Byrne , A. Philip Dawid

Traditionally, graph neural networks have been trained using a single observed graph. However, the observed graph represents only one possible realization. In many applications, the graph may encounter uncertainties, such as having…

Machine Learning · Computer Science 2024-10-10 See Hian Lee , Feng Ji , Kelin Xia , Wee Peng Tay

Graphical models are used to describe the conditional independence relations in multivariate data. They have been used for a variety of problems, including log-linear models (Liu and Massam, 2006), network analysis (Holland and Leinhardt,…

Statistics Theory · Mathematics 2008-07-23 Daniel Heinz

We propose a directed acyclic hypergraph framework for a probabilistic graphical model that we call Bayesian hypergraphs. The space of directed acyclic hypergraphs is much larger than the space of chain graphs. Hence Bayesian hypergraphs…

Data Structures and Algorithms · Computer Science 2018-11-22 Mohammad Ali Javidian , Linyuan Lu , Marco Valtorta , Zhiyu Wang

Graphical model learning and inference are often performed using Bayesian techniques. In particular, learning is usually performed in two separate steps. First, the graph structure is learned from the data; then the parameters of the model…

Statistics Theory · Mathematics 2013-09-09 Marco Scutari

Markov random fields are common prior distributions used in Bayesian inverse imaging problems. In particular, difference priors assign probability distributions to differences between neighbouring pixels, such as Gaussian, Laplace, or…

Methodology · Statistics 2026-05-19 Jasper Marijn Everink

Graphical models express conditional independence relationships among variables. Although methods for vector-valued data are well established, functional data graphical models remain underdeveloped. We introduce a notion of conditional…

Methodology · Statistics 2016-01-06 Hongxiao Zhu , Nate Strawn , David B. Dunson

We present a general framework for defining priors on model structure and sampling from the posterior using the Metropolis-Hastings algorithm. The key idea is that structure priors are defined via a probability tree and that the proposal…

Artificial Intelligence · Computer Science 2013-01-14 Nicos Angelopoulos , James Cussens

A new methodology for model determination in decomposable graphical Gaussian models is developed. The Bayesian paradigm is used and, for each given graph, a hyper inverse Wishart prior distribution on the covariance matrix is considered.…

Computation · Statistics 2015-03-13 Sophie Donnet , Jean-Michel Marin

Given an undirected graph G or hypergraph X model for a given set of variables V, we introduce two marginalization operators for obtaining the undirected graph GA or hypergraph HA associated with a given subset A c V such that the marginal…

Artificial Intelligence · Computer Science 2013-02-01 Enrique F. Castillo , Juan Ferrándiz , Pilar Sanmartin

Posterior sampling is a task of central importance in Bayesian inference. For many applications in Bayesian meta-analysis and Bayesian transfer learning, the prior distribution is unknown and needs to be estimated from samples. In practice,…

Computation · Statistics 2024-08-06 Chenyang Zhong , Shouxuan Ji , Tian Zheng

The structure-property hypothesis says that the properties of all materials are determined by an underlying crystal structure. The main obstacle was the ambiguity of conventional crystal representations based on incomplete or discontinuous…

Computational Physics · Physics 2024-05-08 Jonathan Balasingham , Viktor Zamaraev , Vitaliy Kurlin

Hierarchical structure and repetition are prevalent in graphs originating from nature or engineering. These patterns can be represented by a class of parametric-structure graphs, which are defined by templates that generate structure by way…

Data Structures and Algorithms · Computer Science 2020-11-16 Tal Ben-Nun , Lukas Gianinazzi , Torsten Hoefler , Yishai Oltchik

Graphical models encode conditional independence statements of a multivariate distribution via a graph. Traditionally, the marginal distributions in a graphical model are assumed to be Gaussian. In this paper, we propose a three-level…

Methodology · Statistics 2025-05-01 Luis E. Nieto-Barajas , Simón Lunagómez

Random graphs are more and more used for modeling real world networks such as evolutionary networks of proteins. For this purpose we look at two different models and analyze how properties like connectedness and degree distributions are…

Probability · Mathematics 2019-02-05 Klemens Taglieber , Uta Freiberg

We introduce a Markov Chain Monte Carlo algorithm which samples from the space of spanning trees of complete graphs using local rewiring operations only. The probability distribution of graphs of this kind is shown to depend on the…

Discrete Mathematics · Computer Science 2017-11-21 Neal McBride , John Bulava

We propose an extension of the Contextual Graph Markov Model, a deep and probabilistic machine learning model for graphs, to model the distribution of edge features. Our approach is architectural, as we introduce an additional Bayesian…

Machine Learning · Computer Science 2023-08-21 Daniele Atzeni , Federico Errica , Davide Bacciu , Alessio Micheli

This paper presents a novel theoretical Monte Carlo Markov chain procedure in the framework of graphs. It specifically deals with the construction of a Markov chain whose empirical distribution converges to a given reference one. The Markov…

Probability · Mathematics 2019-07-02 Roy Cerqueti , Emilio De Santis

We propose algorithms for construction and random generation of hypergraphs without loops and with prescribed degree and dimension sequences. The objective is to provide a starting point for as well as an alternative to Markov chain Monte…

Data Structures and Algorithms · Computer Science 2020-04-14 Naheed Anjum Arafat , Debabrota Basu , Laurent Decreusefond , Stephane Bressan

Metric graphs are useful tools for describing spatial domains like road and river networks, where spatial dependence act along the network. We take advantage of recent developments for such Gaussian Random Fields (GRFs), and consider joint…

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