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Applications with low data reuse and frequent irregular memory accesses, such as graph or sparse linear algebra workloads, fail to scale well due to memory bottlenecks and poor core utilization. While prior work with prefetching,…

Hardware Architecture · Computer Science 2023-05-05 Marcelo Orenes-Vera , Esin Tureci , David Wentzlaff , Margaret Martonosi

The algorithms in the current sequential numerical linear algebra libraries (e.g. LAPACK) do not parallelize well on multicore architectures. A new family of algorithms, the tile algorithms, has recently been introduced. Previous research…

Mathematical Software · Computer Science 2010-02-23 Emmanuel Agullo , Henricus Bouwmeester , Jack Dongarra , Jakub Kurzak , Julien Langou , Lee Rosenberg

Tuning numerical libraries has become more difficult over time, as systems get more sophisticated. In particular, modern multicore machines make the behaviour of algorithms hard to forecast and model. In this paper, we tackle the issue of…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-02-28 Emmanuel Agullo , Jack Dongarra , Rajib Nath , Stanimire Tomov

The dominant contribution to communication complexity in factorizing a matrix using QR with column pivoting is due to column-norm updates that are required to process pivot decisions. We use randomized sampling to approximate this process…

Numerical Analysis · Mathematics 2018-01-23 Jed A. Duersch , Ming Gu

We propose a novel approach to iterated sparse matrix dense matrix multiplication, a fundamental computational kernel in scientific computing and graph neural network training. In cases where matrix sizes exceed the memory of a single…

This paper develops and analyzes a new algorithm for QR decomposition with column pivoting (QRCP) of rectangular matrices with many more rows than columns. The algorithm carefully combines methods from randomized numerical linear algebra to…

Numerical Analysis · Mathematics 2025-03-18 Maksim Melnichenko , Oleg Balabanov , Riley Murray , James Demmel , Michael W. Mahoney , Piotr Luszczek

We explore the trade-offs of performing linear algebra using Apache Spark, compared to traditional C and MPI implementations on HPC platforms. Spark is designed for data analytics on cluster computing platforms with access to local disks…

In this work, we develop a new fast algorithm, spaQR -- sparsified QR, for solving large, sparse linear systems. The key to our approach is using low-rank approximations to sparsify the separators in a Nested Dissection based Householder QR…

Numerical Analysis · Mathematics 2020-10-15 Abeynaya Gnanasekaran , Eric Darve

Distributed training with synchronous stochastic gradient descent (SGD) on GPU clusters has been widely used to accelerate the training process of deep models. However, SGD only utilizes the first-order gradient in model parameter updates,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-15 Shaohuai Shi , Lin Zhang , Bo Li

Recommendation systems, social network analysis, medical imaging, and data mining often involve processing sparse high-dimensional data. Such high-dimensional data are naturally represented as tensors, and they cannot be efficiently…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-22 Weiyun Jiang , Kaiqi Zhang , Colin Yu Lin , Feng Xing , Zheng Zhang

This paper introduces RankMap, a platform-aware end-to-end framework for efficient execution of a broad class of iterative learning algorithms for massive and dense datasets. Our framework exploits data structure to factorize it into an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-28 Azalia Mirhoseini , Eva L. Dyer , Ebrahim. M. Songhori , Richard G. Baraniuk , Farinaz Koushanfar

Architectures with multiple classes of memory media are becoming a common part of mainstream supercomputer deployments. So called multi-level memories offer differing characteristics for each memory component including variation in…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-04 Mehmet Deveci , Simon D. Hammond , Michael M. Wolf , Sivasankaran Rajamanickam

The scalable solution of large sparse linear systems is a bottleneck in scientific computing and graph analysis. While algebraic multigrid (AMG) offers optimal linear scaling, its performance is severely constrained by the trade-off between…

Machine Learning · Computer Science 2026-05-27 Yali Fink , Ido Ben-Yair , Lars Ruthotto , Eran Treister

Systems of linear equations arise at the heart of many scientific and engineering applications. Many of these linear systems are sparse; i.e., most of the elements in the coefficient matrix are zero. Direct methods based on matrix…

Mathematical Software · Computer Science 2016-08-24 Mathias Jacquelin , Yili Zheng , Esmond Ng , Katherine Yelick

Clustering is an important tool in data analysis, with K-means being popular for its simplicity and versatility. However, it cannot handle non-linearly separable clusters. Kernel K-means addresses this limitation but requires a large kernel…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-29 Julian Bellavita , Matthew Rubino , Nakul Iyer , Andrew Chang , Aditya Devarakonda , Flavio Vella , Giulia Guidi

We propose efficient parallel algorithms and implementations on shared memory architectures of LU factorization over a finite field. Compared to the corresponding numerical routines, we have identified three main difficulties specific to…

Symbolic Computation · Computer Science 2014-02-17 Jean-Guillaume Dumas , Thierry Gautier , Clément Pernet , Ziad Sultan

Sketching is widely used in randomized linear algebra for low-rank matrix approximation, column subset selection, and many other problems, and it has gained significant traction in machine learning applications. However, sketching large…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-24 Hussam Al Daas , Grey Ballard , Laura Grigori , Md Taufique Hussain , Suraj Kumar , Mohammad Marufur Rahman , Kathryn Rouse

This paper advocates for an intertwined design of the dense linear algebra software stack that breaks down the strict barriers between the high-level, blocked algorithms in LAPACK (Linear Algebra PACKage) and the low-level,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-01 Héctor Martínez , Sandra Catalán , Francisco D. Igual , José R. Herrero , Rafael Rodríguez-Sánchez , Enrique S. Quintana-Ortí

Communication-avoiding algorithms allow redundant computations to minimize the number of inter-process communications. In this paper, we propose to exploit this redundancy for fault-tolerance purpose. We illustrate this idea with QR…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-03 Camille Coti

Kernel matrices, as well as weighted graphs represented by them, are ubiquitous objects in machine learning, statistics and other related fields. The main drawback of using kernel methods (learning and inference using kernel matrices) is…

Machine Learning · Computer Science 2022-12-02 Ainesh Bakshi , Piotr Indyk , Praneeth Kacham , Sandeep Silwal , Samson Zhou