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Spiking activity of neurons engaged in learning and performing a task show complex spatiotemporal dynamics. While the output of recurrent network models can learn to perform various tasks, the possible range of recurrent dynamics that…

Neurons and Cognition · Quantitative Biology 2018-08-21 Christopher Kim , Carson Chow

In this paper we present a network model to study the impact of spatial distribution of constituents, coupling between them and diffusive processes in the context of biological situations. The model is in terms of network of mobile elements…

Molecular Networks · Quantitative Biology 2007-05-23 Kanchan Thadani , Ashutosh

Mammalian brains operate in a very special surrounding: to survive they have to react quickly and effectively to the pool of stimuli patterns previously recognized as danger. Many learning tasks often encountered by living organisms involve…

Brain plasticity refers to brain's ability to change neuronal connections, as a result of environmental stimuli, new experiences, or damage. In this work, we study the effects of the synaptic delay on both the coupling strengths and…

Neurons and Cognition · Quantitative Biology 2018-11-14 E. L. Lameu , E. E. N. Macau , F. S. Borges , K. C. Iarosz , I. L. Caldas , R. R. Borges , P. R. Protachevicz , R. L. Viana , A. M. Batista

Complex environments provide structured yet variable sensory inputs. To best exploit information from these environments, organisms must evolve the ability to anticipate consequences of unknown stimuli, and act on these predictions. We…

Neural and Evolutionary Computing · Computer Science 2019-07-16 Lana Sinapayen , Atsushi Masumori , Ikegami Takashi

It has been demonstrated that one of the most striking features of the nervous system, the so called 'plasticity' (i.e high adaptability at different structural levels) is primarily based on Hebbian learning which is a collection of…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 G. Szirtes , Zs. Palotai , A. Lorincz

Understanding how biological constraints shape neural computation is a central goal of computational neuroscience. Spatially embedded recurrent neural networks provide a promising avenue to study how modelled constraints shape the combined…

Neural and Evolutionary Computing · Computer Science 2024-09-27 Cornelia Sheeran , Andrew S. Ham , Duncan E. Astle , Jascha Achterberg , Danyal Akarca

Despite the huge interest in network resilience to stress, most of the studies have concentrated on internal stress damaging network structure (e.g., node removals). Here we study how networks respond to environmental stress deteriorating…

Physics and Society · Physics 2018-04-24 Young-Ho Eom

Reconstructing network connectivity from the collective dynamics of a system typically requires access to its complete continuous-time evolution although these are often experimentally inaccessible. Here we propose a theory for revealing…

Neurons and Cognition · Quantitative Biology 2018-08-08 Jose Casadiego , Dimitra Maoutsa , Marc Timme

Hierarchically modular organization is a canonical network topology that is evolutionarily conserved in the nervous systems of animals. Within the network, neurons form directional connections defined by the growth of their axonal…

Neurons and Cognition · Quantitative Biology 2024-04-26 Nobuaki Monma , Hideaki Yamamoto , Naoya Fujiwara , Hakuba Murota , Satoshi Moriya , Ayumi Hirano-Iwata , Shigeo Sato

We propose a physical model for developmental process at cellular level to discuss the mechanism of epigenetic landscape. In our simplified model, a minimal model, the network of the interaction among cells generates the landscape…

Cell Behavior · Quantitative Biology 2014-02-04 Motoki Nakagawa , Osamu Narikiyo

Criticality has been conjectured as an integral part of neuronal network dynamics. Operating at a critical threshold requires precise parameter tuning and a corresponding mechanism remains an open question. Recent studies have suggested…

Neurons and Cognition · Quantitative Biology 2021-04-19 Nikita Gutjahr , Philipp Hövel , Aline Viol

Recent studies have been using graph theoretical approaches to model complex networks (such as social, infrastructural or biological networks), and how their hardwired circuitry relates to their dynamic evolution in time. Understanding how…

Neurons and Cognition · Quantitative Biology 2015-07-17 Anca Radulescu

Neural circuits comprise multiple interconnected regions, each with complex dynamics. The interplay between local and global activity is thought to underlie computational flexibility, yet the structure of multiregion neural activity and its…

Neurons and Cognition · Quantitative Biology 2025-01-09 David G. Clark , Manuel Beiran

Brain development during adolescence is marked by substantial changes in brain structure and function, leading to a stable network topology in adulthood. However, most prior work has examined the data through the lens of brain areas…

Quantitative Methods · Quantitative Biology 2016-12-26 Shi Gu , Muzhi Yang , John D. Medaglia , Ruben C. Gur , Raquel E. Gur , Theodore D. Satterthwaite , Danielle S. Bassett

How does the size of a neural circuit influence its learning performance? Intuitively, we expect the learning capacity of a neural circuit to grow with the number of neurons and synapses. Larger brains tend to be found in species with…

Neurons and Cognition · Quantitative Biology 2019-05-09 Dhruva V Raman , Timothy O'Leary

Dynamical wiring and rewiring in neural networks are carried out by activity-dependent growth and retraction of axons and dendrites, guided by gudance molecules, released by target cells. Experience-dependent structural changes in cortical…

Neurons and Cognition · Quantitative Biology 2007-05-23 Fail M. Gafarov

We present a study on the emergence of a variety of spatio temporal patterns among neurons that are connected in a multiplex framework, with neurons on two layers with different functional couplings. With the Hindmarsh-Rose model for the…

Adaptation and Self-Organizing Systems · Physics 2021-11-29 Umesh Kumar Verma , G. Ambika

Previous research has shown a clear relationship between sleep and memory, examining the impact of sleep deprivation on key cognitive processes over very short durations or in special populations. Here, we show, in a longitudinal 16 week…

In epidemiological modelling, dynamics on networks, and in particular adaptive and heterogeneous networks have recently received much interest. Here we present a detailed analysis of a previously proposed model that combines heterogeneity…

Physics and Society · Physics 2016-09-21 Hui Yang , Tim Rogers , Thilo Gross