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Choosing a uniformly sampled simple directed graph realization of a degree sequence has many applications, in particular in social networks where self-loops are commonly not allowed. It has been shown in the past that one can perform a…

Discrete Mathematics · Computer Science 2009-12-22 M. Drew Lamar

The problem of efficiently sampling from a set of (undirected, or directed) graphs with a given degree sequence has many applications. One approach to this problem uses a simple Markov chain, which we call the switch chain, to perform the…

Discrete Mathematics · Computer Science 2017-09-13 Catherine Greenhill , Matteo Sfragara

Randomising networks using a naive `accept-all' edge-swap algorithm is generally biased. Building on recent results for nondirected graphs, we construct an ergodic detailed balance Markov chain with non-trivial acceptance probabilities for…

Quantitative Methods · Quantitative Biology 2011-12-21 E. S. Roberts , A. C. C. Coolen

The problem of efficiently sampling from a set of(undirected) graphs with a given degree sequence has many applications. One approach to this problem uses a simple Markov chain, which we call the switch chain, to perform the sampling. The…

Data Structures and Algorithms · Computer Science 2014-12-18 Catherine Greenhill

The switch Markov chain has been extensively studied as the most natural Markov Chain Monte Carlo approach for sampling graphs with prescribed degree sequences. We use comparison arguments with other, less natural but simpler to analyze,…

Discrete Mathematics · Computer Science 2018-10-29 Georgios Amanatidis , Pieter Kleer

The approximate uniform sampling of graph realizations with a given degree sequence is an everyday task in several social science, computer science, engineering etc. projects. One approach is using Markov chains. The best available current…

Combinatorics · Mathematics 2024-01-09 Péter L. Erdős , Tamás Róbert Mezei , István Miklós

The configuration model is a standard tool for uniformly generating random graphs with a specified degree sequence, and is often used as a null model to evaluate how much of an observed network's structure can be explained by its degree…

Social and Information Networks · Computer Science 2023-05-31 Upasana Dutta , Bailey K. Fosdick , Aaron Clauset

Since 1997 a considerable effort has been spent on the study of the swap (switch) Markov chains on graphic degree sequences. Several results were proved on rapidly mixing Markov chains on regular simple, on regular directed, on half-regular…

Combinatorics · Mathematics 2019-11-07 Péter L. Erdős , Tamás Róbert Mezei , István Miklós

In network modeling of complex systems one is often required to sample random realizations of networks that obey a given set of constraints, usually in form of graph measures. A much studied class of problems targets uniform sampling of…

Combinatorics · Mathematics 2018-05-22 Péter L. Erdős , István Miklós , Zoltán Toroczkai

Since 1997 a considerable effort has been spent to study the mixing time of switch Markov chains on the realizations of graphic degree sequences of simple graphs. Several results were proved on rapidly mixing Markov chains on unconstrained,…

One of the simplest methods of generating a random graph with a given degree sequence is provided by the Monte Carlo Markov Chain method using switches. The switch Markov chain converges to the uniform distribution, but generally the rate…

Combinatorics · Mathematics 2021-07-06 Péter L. Erdős , Ervin Győri , Tamás Róbert Mezei , István Miklós , Dániel Soltész

Uniform sampling from graphical realizations of a given degree sequence is a fundamental component in simulation-based measurements of network observables, with applications ranging from epidemics, through social networks to Internet…

Physics and Society · Physics 2010-04-14 Charo I. Del Genio , Hyunju Kim , Zoltan Toroczkai , Kevin E. Bassler

One of the most influential recent results in network analysis is that many natural networks exhibit a power-law or log-normal degree distribution. This has inspired numerous generative models that match this property. However, more recent…

Data Structures and Algorithms · Computer Science 2011-09-01 Isabelle Stanton , Ali Pinar

Sampling uniform simple graphs with power-law degree distributions with degree exponent $\tau\in(2,3)$ is a non-trivial problem. We propose a method to sample uniform simple graphs that uses a constrained version of the configuration model…

Probability · Mathematics 2017-11-17 Tom Bannink , Remco van der Hofstad , Clara Stegehuis

An important problem arising in the study of complex networks, for instance in community detection and motif finding, is the sampling of graphs with fixed degree sequence. The equivalent problem of generating random 0,1 matrices with fixed…

Combinatorics · Mathematics 2018-07-27 Annabell Berger , Corrie Jacobien Carstens

Directed acyclic graphs are the basic representation of the structure underlying Bayesian networks, which represent multivariate probability distributions. In many practical applications, such as the reverse engineering of gene regulatory…

Computation · Statistics 2013-11-15 Jack Kuipers , Giusi Moffa

We study a colored generalization of the famous simple-switch Markov chain for sampling the set of graphs with a fixed degree sequence. Here we consider the space of graphs with colored vertices, in which we fix the degree sequence and…

Discrete Mathematics · Computer Science 2026-05-06 Félix Almendra-Hernández , Jesús A. De Loera , Sonja Petrović

We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…

Data Structures and Algorithms · Computer Science 2020-07-08 Luís M. S. Russo , Andreia Sofia Teixeira , Alexandre P Francisco

We propose a Markov chain simulation method to generate simple connected random graphs with a specified degree sequence and level of clustering. The networks generated by our algorithm are random in all other respects and can thus serve as…

Discrete Mathematics · Computer Science 2010-02-09 Shweta Bansal , Shashank Khandelwal , Lauren Ancel Meyers

Uniform sampling of simple graphs having a given degree sequence is a known problem with exponential complexity in the square of the mean degree. For undirected graphs, randomised approximation algorithms have nonetheless been shown to…

Probability · Mathematics 2022-06-28 Femke van Ieperen , Ivan Kryven
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