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Molecular dynamics simulations are performed to investigate the buckling of single-layer MoS2 under uniaxial compression. The strain rate is found to play an important role on the critical buckling strain, where higher strain rate leads to…

Materials Science · Physics 2015-04-14 Jin-Wu Jiang

Using computer simulation and analytical theory, we study an active analog of the well-known Tonks gas, where active Brownian particles are confined to a one-dimensional (1D) channel. By introducing the notion of a kinetic temperature, we…

Soft Condensed Matter · Physics 2024-01-09 Elijah Schiltz-Rouse , Hyeongjoo Row , Stewart A. Mallory

The research reveals the existence of a constant characteristic time of preparatory micro-structural processes before the onset of macro-failure at various high loading rates of brittle and quasi-brittle materials. The presence of this…

Materials Science · Physics 2023-01-23 Ivan Smirnov

Oriented block copolymers exhibit a buckling instability when submitted to a tensile test perpendicular to the lamellae direction. In this paper we study this behavior using a coarse grained molecular dynamics simulation approach. Coarse…

Materials Science · Physics 2014-03-05 Ali Makke , Olivier Lame , Michel Perez , Jean-Louis Barrat

We study the influence of solid boundaries on dynamics and structure of active fluids as the height of the container, $z$, changes. Along the varying dimension, the geometry systematically increases, therefore, the confinement ($z$)…

Soft Condensed Matter · Physics 2021-09-08 Yi Fan , Kun-Ta Wu , Ali Aghvami , Seth Fraden , Kenneth Breuer

In this work we present the design of a new test geometry inspired by the Tapered Double Cantilever Beam (TDCB) specimen that is shown to provide an improved characterization of the fracture properties of brittle solids. First, we show that…

Minimal energy shapes of closed, elastic shells with twelve pentagonal disclinations introduced in otherwise hexagonally coordinated crystalline lattice are studied. The geometry and the total energy of shells are studied as a function of…

Biological Physics · Physics 2007-05-23 Antonio Siber

The static and dynamical properties of heavy water have been studied at ambient conditions with extensive Car-Parrinello molecular-dynamics simulations in the canonical ensemble, with temperatures ranging between 325 K and 400 K.…

Soft Condensed Matter · Physics 2007-05-23 P. H-L. Sit , Nicola Marzari

We present a comprehensive computational study of the short-time transport properties of bidisperse neutral colloidal suspensions and the corresponding porous media. Our study covers bidisperse particle size ratios up to $4$, and total…

Soft Condensed Matter · Physics 2015-06-23 Mu Wang , John F. Brady

In layered materials, a common mode of deformation involves buckling of the layers under tensile deformation in the direction perpendicular to the layers. The instability mechanism, which operates in elastic materials from geological to…

Materials Science · Physics 2012-01-13 Ali Makke , Michel Perez , Olivier Lame , Jean-Louis Barrat

This study reports a general scenario for the out-of-equilibrium features of collapsing polymeric architectures. We use molecular dynamics simulations to characterize the coarsening kinetics, in bad solvent, for several macromolecular…

Soft Condensed Matter · Physics 2019-12-10 Mariarita Paciolla , Daniel J. Arismendi-Arrieta , Angel J. Moreno

The mechanical characteristics of fibers (of various materials), as well as of fiber bundles, are of primary importance for the design and the mechanical behavior of textiles, or of fibrous and composite materials. These characteristics are…

Soft Condensed Matter · Physics 2026-03-17 Jerome Weiss

By means of two-dimensional contact dynamics simulations, we analyze the vibrational dynamics of a confined granular layer in response to harmonic forcing. We use irregular polygonal grains allowing for strong variability of solid fraction.…

Classical Physics · Physics 2016-08-16 Emilien Azema , Farhang Radjaï , Robert Peyroux , Frédéric Dubois , Gilles Saussine

In heterogeneous solids such as rocks and concrete, the speed of sound diminishes with the strain amplitude of a dynamic loading (softening). This decrease known as "slow dynamics" occurs at time scales larger than the period of the…

Classical Physics · Physics 2020-12-09 H Berjamin , N Favrie , B Lombard , G Chiavassa

Extensive research has been carried out for at least 50 years to understand the mechanical properties of brain tissue in order to understand the mechanisms of traumatic brain injury (TBI). The observed large variability in experimental…

Medical Physics · Physics 2013-03-04 Badar Rashid , Michel Destrade , Michael Gilchrist

We propose a multiscale mechanobiological model of bone remodelling to investigate the site-specific evolution of bone volume fraction across the midshaft of a femur. The model includes hormonal regulation and biochemical coupling of bone…

Tissues and Organs · Quantitative Biology 2016-05-13 C. Lerebours , P. R. Buenzli , S. Scheiner , P. Pivonka

We present a general theoretical analysis of semiflexible filaments subject to viscous drag or point forcing. These are the relevant forces in dynamic experiments designed to measure biopolymer bending moduli. By analogy with the ``Stokes…

Soft Condensed Matter · Physics 2009-10-30 Chris H. Wiggins , Daniel X. Riveline , Albrecht Ott , Raymond E. Goldstein

We investigate the nonequilibrium dynamics of semiflexible polymers driven by motor proteins (MPs) in two-dimensional motility assays under harmonic confinement. Using a coarse-grained agent-based model that incorporates stochastic motor…

Soft Condensed Matter · Physics 2025-09-09 Sandip Roy , Abhishek Chaudhuri , Anil Kumar Dasanna

The cellular cytoskeleton is an active material, driven out of equilibrium by molecular motor proteins. It is not understood how the collective behaviors of cytoskeletal networks emerge from the properties of the network's constituent motor…

Subcellular Processes · Quantitative Biology 2017-12-19 Peter J. Foster , Wen Yan , Sebastian Fürthauer , Michael J. Shelley , Daniel J. Needleman

The main goal of this work is to clarify and quantify, by means of mathematical analysis, the role of structural viscoelasticity in the biomechanical response of deformable porous media with incompressible constituents to sudden changes in…

Analysis of PDEs · Mathematics 2017-10-03 Maurizio Verri , Giovanna Guidoboni , Lorena Bociu , Riccardo Sacco