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We investigate the mechanical behavior of a confined granular packing of irregular polyhedral particles under repeated heating and cooling cycles by means of numerical simulations with the Non-Smooth Contact Dynamics method. Assuming a…

Natural hard composites like human bone possess a combination of strength and toughness that exceeds that of their constituents and of many engineered composites. This augmentation is attributed to their complex hierarchical structure,…

Unconfined compression tests are more convenient to perform on cylindrical samples of brain tissue than tensile tests in order to estimate mechanical properties of the brain tissue because they allow for homogeneous deformations. The…

Medical Physics · Physics 2013-03-04 Badar Rashid , Michel Destrade , Michael Gilchrist

The purpose of this study was to report numerical validation of a 3D finite element model of contracting muscle. The model was based on continuum theory for fibre-reinforced composite materials. Here we simulated contractions for an…

Quantitative Methods · Quantitative Biology 2015-04-03 Hadi Rahemi , Nilima Nigam , James M. Wakeling

The most recent experimental advances could provide ways for the fabrication of several atomic thick and planar forms of boron atoms. For the first time, we explore the mechanical properties of five types of boron films with various vacancy…

Materials Science · Physics 2017-04-17 Minh-Quy Le , Bohayra Mortazavi , Timon Rabczuk

Dynamic particle-scale numerical simulations are used to show that the shear thickening observed in dense colloidal, or Brownian, suspensions is of a similar nature to that observed in non-colloidal suspensions, i.e., a stress-induced…

Soft Condensed Matter · Physics 2015-12-04 Romain Mari , Ryohei Seto , Jeffrey F. Morris , Morton M. Denn

We performed molecular dynamics simulations to investigate the viscoelastic properties of aqueous protein solutions containing an antifreeze protein, a toxin protein, and bovine serum albumin. These simulations covered a temperature range…

Soft Condensed Matter · Physics 2023-09-19 Dillon F. Hanlon , Ivan Saika-Voivod , M. Shajahan G. Razul , G. Todd Andrews

Several controversial issues concerning the packing of linear DNA in bacteriophages and globules are discussed. Exact relations for the osmotic pressure, capsid pressure and loading force are derived in terms of the hole size inside phages…

Soft Condensed Matter · Physics 2007-05-23 Theo Odijk

We study the compression and extension dynamics of a DNA-like polymer interacting with non-DNA binding and DNA-binding proteins, by means of computer simulations. The geometry we consider is inspired by recent experiments probing the…

Soft Condensed Matter · Physics 2017-09-13 M. C. F. Pereira , C. A. Brackley , J. S. Lintuvuori , D. Marenduzzo , E. Orlandini

Bone tissue mechanical properties and trabecular microarchitecture are the main factors that determine the biomechanical properties of cancellous bone. Artificial cancellous microstructures, typically described by a reduced number of…

Medical Physics · Physics 2017-07-07 Lucas Colabella , Adrián Cisilino , Guillaume Haiat , Piotr Kowalczyk

The effect of self-generated tension in the backbone of a bottle-brush (BB) macromolecule, adsorbed on an attractive surface, is studied by means of Molecular Dynamics simulations of a coarse-grained bead-spring model in the good solvent…

Soft Condensed Matter · Physics 2015-06-03 J. Paturej , L. Kuban , A. Milchev , T. A. Vilgis

Collagen fibrils are the building block of many biological tissues, which viability depend on the fibrils properties. Altered properties of collagen fibrils are central to the appearance of many diseases, while physiological or native…

Soft Condensed Matter · Physics 2026-05-08 Konstantinos Steiakakis , Alan Pichard , Maxime Vassaux

Recent studies in mammalian hearts show that left ventricular wall thickening is an important mechanism for systolic ejection and that during contraction the cardiac muscle develops significant stresses in the muscular cross-fiber…

Analysis of PDEs · Mathematics 2008-12-04 Christian Bourdarias , Stéphane Gerbi , Jacques Ohayon

We use optical trapping to continuously bend an isolated microtubule while simultaneously measuring the applied force and the resulting filament strain, thus allowing us to determine its elastic properties over a wide range of applied…

Biological Physics · Physics 2018-07-24 Edvin Memet , Feodor Hilitski , Margaret A Morris , Walter J Schwenger , Zvonimir Dogic , L Mahadevan

A nonlinear dynamical system model that approximates a microscopic Gibbs field model for the yielding of a viscoplastic material subjected to varying external stress recently reported in [1] is presented. The predictions of the model are in…

Soft Condensed Matter · Physics 2016-10-04 Sainudiin Raazesh , Moyers-Gonzalez Miguel , Burghelea Teodor

Degenerative discopathy is a common pathology which may require spine surgery. A metallic cylindrical pin is inserted into the vertebral body to maintain soft tissues and may be used as a reflector of ultrasonic wave to estimate bone…

The motion of a long gas bubble in a confined capillary tube is ubiquitous in a wide range of engineering and biological applications. While the understanding of the deposited thin viscous film near the tube wall in Newtonian fluids is well…

Fluid Dynamics · Physics 2022-12-21 SungGyu Chun , Bingqiang Ji , Zhengyu Yang , Vinit Kumar Malik , Jie Feng

The work describes a numerical method to study the nature of compressive failure of porous ceramics in relation to its volume fraction. The microstructure of an alumina-based foam material manufactured by mechanical stirring of a slurry is…

Applied Physics · Physics 2025-03-13 Vinit Vijay Deshpande , Romana Piat

This work presents a model that successfully describes the tensile properties of macroscopic fibres of carbon nanotubes (CNTs). The core idea is to treat such a fibre as a network of CNT bundles, similar to the structure of high-performance…

Materials Science · Physics 2019-03-01 J. C. Fernández-Toribio , B. Alemán , A. Ridruejo , J. J. Vilatela

Strain rate and temperature dependence of the tensile strength of single-walled carbon nanotubes has been investigated with molecular dynamics simulations. The tensile failure or yield strain is found to be strongly dependent on the…

Condensed Matter · Physics 2009-11-07 Chenyu Wei , Kyeongjae Cho , Deepak Srivastava