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The Random Geometric Graph (RGG) is a random graph model for network data with an underlying spatial representation. Geometry endows RGGs with a rich dependence structure and often leads to desirable properties of real-world networks such…

Social and Information Networks · Computer Science 2022-08-25 Quentin Duchemin , Yohann de Castro

Nowadays, journalism is facilitated by the existence of large amounts of digital data sources, including many Open Data ones. Such data sources are extremely heterogeneous, ranging from highly struc-tured (relational databases),…

The emergence of R, a freely available data analysis environment, brought to the researcher in any science field a set of well-concerted instruments of immense power and low cost. In botany and zoology, these instruments could be used, for…

Quantitative Methods · Quantitative Biology 2020-02-06 Alexey Shipunov

Although Large Language Models (LLMs) have demonstrated remarkable progress, their proficiency in graph-related tasks remains notably limited, hindering the development of truly general-purpose models. Previous attempts, including…

Machine Learning · Computer Science 2025-08-20 Xiaojun Guo , Ang Li , Yifei Wang , Stefanie Jegelka , Yisen Wang

I will present a way to implement graph algorithms which is different from traditional methods. This work was motivated by the belief that some ideas from software engineering should be applied to graph algorithms. Re-usability of software…

Data Structures and Algorithms · Computer Science 2010-03-24 Marco Nissen

The growing complexity and information content of data, together with the need to understand both the complex structures, relationships, and phenomena present in these data spaces, compounded with the emerging need to understand the results…

Human-Computer Interaction · Computer Science 2026-03-09 Santiago Lombeyda , S. G. Djorgovski , Ciro Donalek

An invitation to simulation is made into a realizable challenge: the reader is taken from scratch to games with words, to mathematical models, to statistical analysis, to simulation of evolution. No special requirements are needed: we work…

Populations and Evolution · Quantitative Biology 2007-05-23 Jose Rodriguez

Graphs, and graph transformation systems, are used in many areas within Computer Science: to represent data structures and algorithms, to define computation models, as a general modelling tool to study complex systems, etc. Research in term…

Symbolic Computation · Computer Science 2021-02-04 Patrick Bahr

Graph processing is used extensively in areas from social networking mining to web indexing. We demonstrate that the performance and dependability of such applications critically hinges on the graph data structure used, because a fixed,…

Programming Languages · Computer Science 2014-12-30 Amlan Kusum , Iulian Neamtiu , Rajiv Gupta

Applied research in graph algorithms and combinatorial structures needs comprehensive and versatile software libraries. However, the design and the implementation of flexible libraries are challenging activities. Among the other problems…

Software Engineering · Computer Science 2007-05-23 Maurizio Pizzonia , Giuseppe Di Battista

Regression analysis is used for prediction and to understand the effect of independent variables on dependent variables. Symbolic regression (SR) automates the search for non-linear regression models, delivering a set of hypotheses that…

Machine Learning · Computer Science 2025-04-09 Fabricio Olivetti de Franca , Gabriel Kronberger

Sentiment Analysis (SA) refers to a family of techniques at the crossroads of statistics, natural language processing, and computational linguistics. The primary goal is to detect the semantic orientation of individual opinions and comments…

Information Retrieval · Computer Science 2026-03-09 Michelangelo Misuraca , Alessia Forciniti , Germana Scepi , Maria Spano

The growing complexity of the power grid, driven by increasing share of distributed energy resources and by massive deployment of intelligent internet-connected devices, requires new modelling tools for planning and operation. Physics-based…

Machine Learning · Statistics 2018-11-26 Francesco Fusco

The adaptive processing of graph data is a long-standing research topic which has been lately consolidated as a theme of major interest in the deep learning community. The snap increase in the amount and breadth of related research has come…

Machine Learning · Computer Science 2020-06-16 Davide Bacciu , Federico Errica , Alessio Micheli , Marco Podda

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

The advancement of scientific knowledge increasingly depends on ensuring that data-driven research is reproducible: that two people with the same data obtain the same results. However, while the necessity of reproducibility is clear, there…

Computers and Society · Computer Science 2020-08-28 Audrey M. Bertin , Benjamin S. Baumer

Nonlinear quantum graphs are metric graphs equipped with a nonlinear Schr{\"o}dinger equation. Whereas in the last ten years they have known considerable developments on the theoretical side, their study from the numerical point of view…

Analysis of PDEs · Mathematics 2021-03-18 Christophe Besse , Romain Duboscq , Stefan Le Coz

RNA 3D architectures are stabilized by sophisticated networks of (non-canonical) base pair interactions, which can be conveniently encoded as multi-relational graphs and efficiently exploited by graph theoretical approaches and recent…

Quantitative Methods · Quantitative Biology 2022-06-03 Vincent Mallet , Carlos Oliver , Jonathan Broadbent , William L. Hamilton , Jérôme Waldispühl

In this work we present a visualization tool specifically tailored to deal with skewed data. The technique is based upon the use of two types of notched boxplots (the usual one, and one which is tuned for the skewness of the data), the…

Computation · Statistics 2014-03-04 R. Ospina , A. M. Larangeiras , A. C. Frery