English
Related papers

Related papers: Topological self-similarity on the random binary-t…

200 papers

A self-similar growth-fragmentation describes the evolution of particles that grow and split as time passes. Its genealogy yields a self-similar continuum tree endowed with an intrinsic measure. Extending results of Haas for pure…

Probability · Mathematics 2018-04-13 François G. Ged

Biology presents many examples of planar distribution and structural networks having dense sets of closed loops. An archetype of this form of network organization is the vasculature of dicotyledonous leaves, which showcases a…

Quantitative Methods · Quantitative Biology 2015-05-30 Eleni Katifori , Marcelo O. Magnasco

This extended abstract is dedicated to the analysis of the height of non-plane unlabelled rooted binary trees. The height of such a tree chosen uniformly among those of size $n$ is proved to have a limiting theta distribution, both in a…

Combinatorics · Mathematics 2008-07-16 Nicolas Broutin , Philippe Flajolet

We extend Edmonds' Branching Theorem to locally finite infinite digraphs. As examples of Oxley or Aharoni and Thomassen show, this cannot be done using ordinary arborescences, whose underlying graphs are trees. Instead we introduce the…

Combinatorics · Mathematics 2020-04-06 J. Pascal Gollin , Karl Heuer

By means of a binary visibility graph, we present a novel method to study random binary sequences. The behavior of the some topological properties of the binary visibility graph, such as the degree distribution, the clustering coefficient,…

Chaotic Dynamics · Physics 2010-04-14 S. Ahadpour , Y. Sadra

We analyse the statistical properties of genealogical trees in a neutral model of a closed population with sexual reproduction and non-overlapping generations. By reconstructing the genealogy of an individual from the population evolution,…

Condensed Matter · Physics 2009-10-31 Bernard Derrida , Susanna C. Manrubia , Damian H. Zanette

Random fields play a central role in the analysis of spatially correlated data and, as a result, have a significant impact on a broad array of scientific applications. This paper studies the cepstral random field model, providing recursive…

Statistics Theory · Mathematics 2014-01-17 Tucker S. McElroy , Scott H. Holan

Statistical properties of the taxonomic classification of human languages are studied. It is shown that, at the highest levels of the taxonomic hierarchy, the frequency of taxon members as a function of the number of languages belonging to…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Damian H. Zanette

Binary trees are fundamental objects in models of evolutionary biology and population genetics. Here, we discuss some of their combinatorial and structural properties as they depend on the tree class considered. Furthermore, the process by…

Populations and Evolution · Quantitative Biology 2021-06-30 Thomas Wiehe

The structure of many real networks is not locally tree-like and hence, network analysis fails to characterise their bond percolation properties. In a recent paper [P. Mann, V. A. Smith, J. B. O. Mitchell, and S. Dobson, Percolation in…

Physics and Society · Physics 2021-01-27 Peter Mann , V. Anne Smith , John B. O. Mitchell , Simon Dobson

We deal with a random graph model evolving in discrete time steps by duplicating and deleting the edges of randomly chosen vertices. We prove the existence of an a.s. asymptotic degree distribution, with streched exponential decay; more…

Probability · Mathematics 2014-11-10 Ágnes Backhausz , Tamás F. Móri

We establish a log-supermodularity property for probability distributions on binary patterns observed at the tips of a tree that are generated under any 2--state Markov process. We illustrate the applicability of this result in…

Populations and Evolution · Quantitative Biology 2008-05-21 Mike Steel , Beata Faller

Null models of binary phylogenetic trees are useful for testing hypotheses on real world phylogenies. In this paper we consider phylogenies as binary trees without edge lengths together with a sampling measure and encode them as algebraic…

Probability · Mathematics 2020-06-17 Josué Nussbaumer , Anita Winter

The probability that two randomly selected phylogenetic trees of the same size are isomorphic is found to be asymptotic to a decreasing exponential modulated by a polynomial factor. The number of symmetrical nodes in a random phylogenetic…

Probability · Mathematics 2009-01-07 Miklos Bona , Philippe Flajolet

We consider a model of random tree growth, where at each time unit a new vertex is added and attached to an already existing vertex chosen at random. The probability with which a vertex with degree $k$ is chosen is proportional to $w(k)$,…

Probability · Mathematics 2007-05-23 Anna Rudas , Balint Toth , Benedek Valko

We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…

Probability · Mathematics 2014-05-06 Rudolf Grübel

New representations of tree-structured data objects, using ideas from topological data analysis, enable improved statistical analyses of a population of brain artery trees. A number of representations of each data tree arise from…

Applications · Statistics 2014-11-26 Paul Bendich , J. S. Marron , Ezra Miller , Alex Pieloch , Sean Skwerer

Understanding the evolution of binary traits, which affects the birth and survival of species and also the rate of molecular evolution, remains challenging. A typical example is the evolution of mating systems in plant species. In this…

Populations and Evolution · Quantitative Biology 2017-04-04 Daniah Tahir , Sylvain Glémin , Martin Lascoux , Ingemar Kaj

We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…

Populations and Evolution · Quantitative Biology 2022-11-08 Johannes Wirtz

We review the notion of symplectic duality earlier introduced in the context of topological recursion. We show that the transformation of symplectic duality can be expressed as a composition of $x-y$ dualities in a broader context of log…

Mathematical Physics · Physics 2024-12-05 Alexander Alexandrov , Boris Bychkov , Petr Dunin-Barkowski , Maxim Kazarian , Sergey Shadrin