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Analytic first and second derivatives of the energy are developed for the fragment molecular orbital method interfaced with molecular mechanics in the electrostatic embedding scheme at the level of Hartree-Fock and density functional…

Chemical Physics · Physics 2020-05-19 Hiroya Nakata , Dmitri G. Fedorov

Consider briefly the equations of fluid dynamics-they describe the enormous wealth of detail in all the interacting physical elements of a fluid flow-whereas in applications we want to deal with a description of just that which is…

chao-dyn · Physics 2016-08-31 A. J. Roberts

Numerically we simulate the effect of optimized coherent control pulses with a finite duration on a qubit in a bath of spins. The pulses of finite duration are compared with ideal instantaneous pulses. In particular, we show that properly…

Quantum Physics · Physics 2008-08-26 P. Karbach , S. Pasini , G. S. Uhrig

Dynamical systems describe the changes in processes that arise naturally from their underlying physical principles, such as the laws of motion or the conservation of mass, energy or momentum. These models facilitate a causal explanation for…

Methodology · Statistics 2023-10-11 Michelle Carey , James O. Ramsay

Numerical simulations of fast remagnetization processes using the stochastic dynamics are widely used to study various magnetic systems. In this paper we first address several crucial methodological problems of such simulations: (i) the…

Other Condensed Matter · Physics 2009-11-10 Dmitri V. Berkov , Natalia L. Gorn

Linear dynamical relations that may exist in continuous-time, or at some natural sampling rate, are not directly discernable at reduced observational sampling rates. Indeed, at reduced rates, matricial spectral densities of vectorial time…

Systems and Control · Computer Science 2018-07-25 Tryphon T. Georgiou , Anders Lindquist

An efficient parallelization approach to simulate optical properties of ensembles of quantum emitters in realistic electromagnetic environments is considered. It relies on balancing computing load of utilized processors and is built into…

Computational Physics · Physics 2023-02-01 Maxim Sukharev

Differential Dynamic Programming (DDP) is an efficient trajectory optimization algorithm relying on second-order approximations of a system's dynamics and cost function, and has recently been applied to optimize systems with time-invariant…

Optimization and Control · Mathematics 2022-04-11 Alex Oshin , Matthew D. Houghton , Michael J. Acheson , Irene M. Gregory , Evangelos A. Theodorou

Calculating dynamical spin correlations is essential for matching model magnetic exchange Hamiltonians to momentum-resolved spectroscopic measurements. A major numerical bottleneck is the diagonalization of the dynamical matrix, especially…

Strongly Correlated Electrons · Physics 2024-11-27 Harry Lane , Hao Zhang , David Dahlbom , Sam Quinn , Rolando D. Somma , Martin Mourigal , Cristian D. Batista , Kipton Barros

Future architectures designed to deliver exascale performance motivate the need for novel algorithmic changes in order to fully exploit their capabilities. In this paper, the performance of several numerical algorithms, characterised by…

Data Structures and Algorithms · Computer Science 2016-10-31 Satya P. Jammy , Christian T. Jacobs , Neil D. Sandham

Maximum likelihood estimation of generalized linear mixed models(GLMMs) is difficult due to marginalization of the random effects. Computing derivatives of a fitted GLMM's likelihood (with respect to model parameters) is also difficult,…

Methodology · Statistics 2022-12-12 Ting Wang , Benjamin Graves , Yves Rosseel , Edgar C. Merkle

We study relationships between dynamic programs by applying conjugacy methods from dynamical systems theory. When two dynamic programs are connected by an order isomorphism, we show that optimality properties transmit from one formulation…

General Economics · Economics 2026-05-22 John Stachurski , Junnan Zhang

Finite differences have been widely used in mathematical theory as well as in scientific and engineering computations. These concepts are constantly mentioned in calculus. Most frequently-used difference formulas provide excellent…

Numerical Analysis · Mathematics 2010-06-09 Brian Jain , Andrew D. Sheng

Classical simulations of high-temperature nuclear spin dynamics in solids are known to accurately predict relaxation for spin 1/2 lattices with a large number of interacting neighbors. Once the number of interacting neighbors becomes four…

Strongly Correlated Electrons · Physics 2019-02-20 Patrick Navez , Grigory A. Starkov , Boris V. Fine

This extensive review was written for the ``Encyclopedia of Complexity and System Science'' (Springer, 2008) and addresses a broad audience ranging from engineers to applied mathematicians, computer scientists and physicists. It provides an…

Auxiliary matrix exponential method is used to derive simple and numerically efficient general expressions for the following, historically rather cumbersome and hard to compute, theoretical methods: (1) average Hamiltonian theory following…

Quantum Physics · Physics 2015-09-30 D. L. Goodwin , Ilya Kuprov

Experiments in coherent spectroscopy correspond to control of quantum mechanical ensembles guiding them from initial to final target states by unitary transformations. The control inputs (pulse sequences) that accomplish these unitary…

Quantum Physics · Physics 2007-05-23 Navin Khaneja , Steffen Glaser

We propose a discretization of the optimality principle in dynamic programming based on radial basis functions and Shepard's moving least squares approximation method. We prove convergence of the approximate optimal value function to the…

Optimization and Control · Mathematics 2014-05-19 Oliver Junge , Alex Schreiber

In the present chapter we focus on the fundamentals of non-grid-conforming numerical approaches to simulating particulate flows, implementation issues and grid convergence vs. available reference data. The main idea is to avoid adapting the…

Fluid Dynamics · Physics 2024-12-11 Markus Uhlmann , Jos Derksen , Anthony Wachs , Lian-Ping Wang , Manuel Moriche

Sequential Monte Carlo methods, also known as particle methods, are a widely used set of computational tools for inference in non-linear non-Gaussian state-space models. In many applications it may be necessary to compute the sensitivity,…

Statistics Theory · Mathematics 2011-06-14 Pierre Del Moral , Arnaud Doucet , Sumeetpal Singh