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In single particle reconstruction (SPR) from cryo-electron microscopy (cryo-EM), the 3D structure of a molecule needs to be determined from its 2D projection images taken at unknown viewing directions. Zvi Kam showed already in 1980 that…

Computer Vision and Pattern Recognition · Computer Science 2016-02-24 Tejal Bhamre , Teng Zhang , Amit Singer

Based on direct integrals, a framework allowing to integrate a parametrised family of reproducing kernels with respect to some measure on the parameter space is developed. By pointwise integration, one obtains again a reproducing kernel…

Functional Analysis · Mathematics 2012-02-21 Thomas Hotz , Fabian J. E. Telschow

In this short article we present the theory of sparse representations recovery in convex regularized optimization problems introduced in (Carioni and Del Grande, arXiv:2311.08072, 2023). We focus on the scenario where the unknowns belong to…

Optimization and Control · Mathematics 2024-06-17 Marcello Carioni , Leonardo Del Grande

We introduce a statistical extension of the classic Poisson Surface Reconstruction algorithm for recovering shapes from 3D point clouds. Instead of outputting an implicit function, we represent the reconstructed shape as a modified Gaussian…

Graphics · Computer Science 2022-09-22 Silvia Sellán , Alec Jacobson

We present a new learning-based framework S-3D-RCNN that can recover accurate object orientation in SO(3) and simultaneously predict implicit rigid shapes from stereo RGB images. For orientation estimation, in contrast to previous studies…

Computer Vision and Pattern Recognition · Computer Science 2024-06-18 Shichao Li , Xijie Huang , Zechun Liu , Kwang-Ting Cheng

We propose a framework to jointly determine the deformation parameters and reconstruct the unknown volume in electron cryotomography (CryoET). CryoET aims to reconstruct three-dimensional biological samples from two-dimensional projections.…

Image and Video Processing · Electrical Eng. & Systems 2023-10-17 Valentin Debarnot , Sidharth Gupta , Konik Kothari , Ivan Dokmanic

The representation theory of deformed oscillator algebras, defined in terms of an arbitrary function of the number operator~$N$, is developed in terms of the eigenvalues of a Casimir operator~$C$. It is shown that according to the nature of…

q-alg · Mathematics 2008-02-03 C. Quesne , N. Vansteenkiste

Intrinsic decomposition from a single image is a highly challenging task, due to its inherent ambiguity and the scarcity of training data. In contrast to traditional fully supervised learning approaches, in this paper we propose learning…

Computer Vision and Pattern Recognition · Computer Science 2018-02-07 Michael Janner , Jiajun Wu , Tejas D. Kulkarni , Ilker Yildirim , Joshua B. Tenenbaum

While multislice electron ptychography can provide thermal-vibration limited resolution and 3D information, it relies on the proper selection of many intertwined experimental and computational parameters. Here, we outline a theoretical…

Materials Science · Physics 2023-11-28 Colin Gilgenbach , Xi Chen , James M. LeBeau

Motivated by the growing interest in representation learning approaches that uncover the latent structure of high-dimensional data, this work proposes new algorithms for reconstruction-based manifold learning within Reproducing-Kernel…

Machine Learning · Computer Science 2026-05-07 Enrique Feito-Casares , Francisco M. Melgarejo-Meseguer , José-Luis Rojo-Álvarez

Establishing structure-property linkages in polycrystalline materials requires representative two- (2D) and three- (3D) dimensional microstructural inputs for full-field simulations. A core objective of microstructure characterization and…

We propose a linear algebraic framework for performing density estimation. It consists of three simple steps: convolving the empirical distribution with certain smoothing kernels to remove the exponentially large variance; compressing the…

Numerical Analysis · Mathematics 2025-10-29 Yifan Peng , Siyao Yang , Yuehaw Khoo , Daren Wang

The amount of information available in spectro-polarimetric data is estimated. To this end, the intrinsic dimensionality of the data is inferred with the aid of a recently derived estimator based on nearest-neighbor considerations and…

Over the past decade, cryogenic electron microscopy (cryo-EM) has emerged as a primary method for determining near-native, near-atomic resolution 3D structures of biological macromolecules. In order to meet increasing demand for cryo-EM,…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Paul T. Kim , Alex J. Noble , Anchi Cheng , Tristan Bepler

Relying on a mathematical analogy of the pure states of the two-qubit system of quantum information theory with four-component spinors we introduce the concept of the intrinsic entanglement of spinors. To explore its physical sense we study…

Quantum Physics · Physics 2024-01-04 K. Scharnhorst

Increasing attention is being focussed on the use of symmetry-adapted functions to describe magnetic structures, structural distortions, and incommensurate crystallography. Though the calculation of such functions is well developed,…

Materials Science · Physics 2016-10-04 Zoso Davies , Andrew Wills

In representation learning, Convolutional Sparse Coding (CSC) enables unsupervised learning of features by jointly optimising both an \(\ell_2\)-norm fidelity term and a sparsity enforcing penalty. This work investigates using a…

Image and Video Processing · Electrical Eng. & Systems 2021-07-15 Perla Mayo , Oktay Karakuş , Robin Holmes , Alin Achim

Cryo-electron microscopy (cryo-EM) is a powerful technique in structural biology and drug discovery, enabling the study of biomolecules at high resolution. Significant advancements by structural biologists using cryo-EM have led to the…

Biomolecules · Quantitative Biology 2024-12-05 Yi Zhou , Yilai Li , Jing Yuan , Quanquan Gu

The scanning electron microscopy (SEM) is probably one the most fascinating examination approach that has been used since more than two decades to detailed inspection of micro scale objects. Most of the scanning electron microscopes could…

Computer Vision and Pattern Recognition · Computer Science 2016-02-18 Wichai Shanklin

Although existing deep learning compressed-sensing-based Magnetic Resonance Imaging (CS-MRI) methods have achieved considerably impressive performance, explainability and generalizability continue to be challenging for such methods since…

Image and Video Processing · Electrical Eng. & Systems 2023-03-14 Xiaohong Fan , Yin Yang , Ke Chen , Jianping Zhang , Ke Dong
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