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Supercomputers are equipped with an increasingly large number of cores to use computational power as a way of solving problems that are otherwise intractable. Unfortunately, getting serial algorithms to run in parallel to take advantage of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-31 Faisal N. Abu-Khzam , Khuzaima Daudjee , Amer E. Mouawad , Naomi Nishimura

What is a systematic way to efficiently apply a wide spectrum of advanced ML programs to industrial scale problems, using Big Models (up to 100s of billions of parameters) on Big Data (up to terabytes or petabytes)? Modern parallelization…

There are billions of lines of sequential code inside nowadays' software which do not benefit from the parallelism available in modern multicore architectures. Automatically parallelizing sequential code, to promote an efficient use of the…

Programming Languages · Computer Science 2016-04-13 Alcides Fonseca , Bruno Cabral , João Rafael , Ivo Correia

Shared memory multiprocessors come back to popularity thanks to rapid spreading of commodity multi-core architectures. As ever, shared memory programs are fairly easy to write and quite hard to optimise; providing multi-core programmers…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-09-10 Marco Aldinucci , Massimo Torquati , Massimiliano Meneghin

Matlab is very widely used in scientific computing, but Matlab computational efficiency is lower than C language program. In order to improve the computing speed, some toolbox can use GPU to accelerate the computation. This paper describes…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-26 Mingzhe Wang , Bo Wang , Qiu He , Xiuxiu Liu , Kunshuai Zhu

To achieve high performance on modern computers, it is vital to map algorithmic parallelism to that inherent in the hardware. From an application developer's perspective, it is also important that code can be maintained in a portable manner…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-20 Alan Gray , Kevin Stratford

Matrix Distributed Processing (MDP) is a C++ library for fast development of efficient parallel algorithms. It constitues the core of FermiQCD. MDP enables programmers to focus on algorithms, while parallelization is dealt with…

High Energy Physics - Lattice · Physics 2007-05-23 Massimo Di Pierro

Large-scale graph processing has drawn great attention in recent years. Most of the modern-day datacenter workloads can be represented in the form of Graph Processing such as MapReduce etc. Consequently, a lot of designs for Domain-Specific…

Hardware Architecture · Computer Science 2022-09-07 Khushal Sethi

Scientific legacy code in MATLAB/Octave not compatible with modernization of research workflows is vastly abundant throughout academic community. Performance of non-vectorized code written in MATLAB/Octave represents a major burden. A new…

Software Engineering · Computer Science 2017-01-10 Vardan Andriasyan , Yauhen Yakimovich , Artur Yakimovich

The vision of super computer at every desk can be realized by powerful and highly parallel CPUs or GPUs or APUs. Graphics processors once specialized for the graphics applications only, are now used for the highly computational intensive…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-16 Chittampally Vasanth Raja , Srinivas Balasubramanian , Prakash S Raghavendra

We have extended the Falkon lightweight task execution framework to make loosely coupled programming on petascale systems a practical and useful programming model. This work studies and measures the performance factors involved in applying…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Ioan Raicu , Zhao Zhang , Mike Wilde , Ian Foster , Pete Beckman , Kamil Iskra , Ben Clifford

We present a novel class of methods to compute functions of matrices or their action on vectors that are suitable for parallel programming. Solving appropriate simple linear systems of equations in parallel (or computing the inverse of…

Numerical Analysis · Mathematics 2022-10-10 Sergio Blanes

Computation of a signal's estimated covariance matrix is an important building block in signal processing, e.g., for spectral estimation. Each matrix element is a sum of products of elements in the input matrix taken over a sliding window.…

Data Structures and Algorithms · Computer Science 2013-03-12 Oded Green , Lior David , Ami Galperin , Yitzhak Birk

Modern HPC systems are increasingly relying on greater core counts and wider vector registers. Thus, applications need to be adapted to fully utilize these hardware capabilities. One class of applications that can benefit from this increase…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-16 James Vance , Zhen-Hao Xu , Nikita Tretyakov , Torsten Stuehn , Markus Rampp , Sebastian Eibl , Christoph Junghans , André Brinkmann

Many useful tasks in data science and machine learning applications can be written as simple variations of matrix multiplication. However, users have difficulty performing such tasks as existing matrix/vector libraries support only a…

Programming Languages · Computer Science 2023-05-17 Junyoung Kim , Kenneth Ross , Eric Sedlar , Lukas Stadler

Task-based programming models have demonstrated their efficiency in the development of scientific applications on modern high-performance platforms. They allow delegation of the management of parallelization to the runtime system (RS),…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-20 Bérenger Bramas

To obtain a better understanding of the trade-offs between various objectives, Bi-Objective Integer Programming (BOIP) algorithms calculate the set of all non-dominated vectors and present these as the solution to a BOIP problem.…

Optimization and Control · Mathematics 2019-09-10 William Pettersson , Melih Ozlen

Efficient Matlab codes in 2D and 3D have been proposed recently to assemble finite element matrices. In this paper we present simple, compact and efficient vectorized algorithms, which are variants of these codes, in arbitrary dimension,…

Mathematical Software · Computer Science 2015-06-22 François Cuvelier , Caroline Japhet , Gilles Scarella

In this chapter, we show why parallel MATLAB is useful, provide a comparison of the different parallel MATLAB choices, and describe a number of applications in Signal and Image Processing: Audio Signal Processing, Synthetic Aperture Radar…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-25 Ashok Krishnamurthy , Siddharth Samsi , Vijay Gadepally

Astronomers are increasingly using Massively Parallel Network of Workstations (MP-NOW) to address their most challenging computing problems. Fully exploiting these systems is made more difficult as more and more modeling and data analysis…

Astrophysics · Physics 2015-05-26 Jeremy Kepner , Maya Gokhale , Ron Minnich , Aaron Marks , John DeGood