Related papers: Cell processor implementation of a MILC lattice QC…
This paper concerns development of a high-performance implementation of the Particle-in-Cell method for plasma simulation on Intel Xeon Phi coprocessors. We discuss suitability of the method for Xeon Phi architecture and present our…
For years, SIMD/vector units have enhanced the capabilities of modern CPUs in High-Performance Computing (HPC) and mobile technology. Typical commercially-available SIMD units process up to 8 double-precision elements with one instruction.…
With at least 50 cores, Intel Xeon Phi is a true many-core architecture. Featuring fairly powerful cores, two cache levels, and very fast interconnections, the Xeon Phi can get a theoretical peak of 1000 GFLOPs and over 240 GB/s. These…
We have used Fortran 90 to implement lattice QCD. We have designed a set of machine independent modules that define fields (gauge, fermions, scalars, etc...) and overloaded operators for all possible operations between fields, matrices and…
We present evidence of the feasibility of using billion core approximate computers to run simple U(1) sigma models, and discuss how the approach might be extended to Lattice Quantum Chromodynamics (LQCD) models. This work is motivated by…
We describe how we have used simultaneously ${\cal O}(10^3)$ nodes of the EGEE Grid, accumulating ca. 300 CPU-years in 2-3 months, to determine an important property of Quantum Chromodynamics. We explain how Grid resources were exploited…
A quick review of the features of FermiQCD, a C++ library for fast development of parallel Lattice QCD applications. FermiQCD is fully Object Oriented and is based on MPI but, it required no previsius knowledge of parallel programming. It…
Systolic arrays and shared-L1-memory manycore clusters are commonly used architectural paradigms that offer different trade-offs to accelerate parallel workloads. While the first excel with regular dataflow at the cost of rigid…
A low-cap power budget is challenging for exascale computing. Dynamic Voltage and Frequency Scaling (DVFS) and Uncore Frequency Scaling (UFS) are the two widely used techniques for limiting the HPC application's energy footprint. However,…
We present a GPU implementation of LAMMPS, a widely-used parallel molecular dynamics (MD) software package, and show 5x to 13x single node speedups versus the CPU-only version of LAMMPS. This new CUDA package for LAMMPS also enables…
We carry out a comparative performance study of multi-core CPUs, GPUs and Intel Xeon Phi (Many Integrated Core - MIC) with a microscopy image analysis application. We experimentally evaluate the performance of computing devices on core…
The Biham-Middleton-Levine (BML) traffic model is a simple two-dimensional, discrete Cellular Automaton (CA) that has been used to study self-organization and phase transitions arising in traffic flows. From the computational point of view,…
Lattice Boltzmann methods (LBM) are an important part of current computational fluid dynamics (CFD). They allow easy implementations and boundary handling. However, competitive time to solution not only depends on the choice of a reasonable…
In this paper we explore the performance of Intel Xeon MAX CPU Series, representing the most significant new variation upon the classical CPU architecture since the Intel Xeon Phi Processor. Given the availability of a large on-package…
Simulating lattice QCD with chiral fermions and indeed using Domain Wall Fermions continues to be challenging project however large are concurrent computers. One obvious bottleneck is the slow pace of prototyping using the low level coding…
In this paper we analyze the MPI-only version of the CloverLeaf code from the SPEChpc 2021 benchmark suite on recent Intel Xeon "Ice Lake" and "Sapphire Rapids" server CPUs. We observe peculiar breakdowns in performance when the number of…
Graphical Processing Units (GPUs) are more and more frequently used for lattice QCD calculations. Lattice studies often require computing the quark propagators for several masses. These systems can be solved using multi-shift inverters but…
Hardware accelerators such as Graphics Processing Units (GPUs), Intel Xeon Phi co-processors (PHIs), and Field-Programmable Gate Arrays (FPGAs) are now ubiquitous in extreme-scale high performance computing (HPC), cloud, and Big data…
The supercomputing platforms available for high performance computing based research evolve at a great rate. However, this rapid development of novel technologies requires constant adaptations and optimizations of the existing codes for…
Typical biomolecular systems such as cellular membranes, DNA, and protein complexes are highly charged. Thus, efficient and accurate treatment of electrostatic interactions is of great importance in computational modelling of such systems.…