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Accessibility percolation is a new type of percolation problem inspired by evolutionary biology. To each vertex of a graph a random number is assigned and a path through the graph is called accessible if all numbers along the path are in…

Statistical Mechanics · Physics 2013-04-04 Stefan Nowak , Joachim Krug

The Prize-Collecting Steiner Tree (PCST) problem is a generalization of the Steiner Tree problem that has applications in network design, content distribution networks, and many more. There are a few centralized approximation algorithms…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-02-21 Parikshit Saikia , Sushanta Karmakar , Aris T. Pagourtzis

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima

We study the \emph{multiterminal cut} problem, which, given an $n$-vertex graph whose edges are integer-weighted and a set of terminals, asks for a partition of the vertex set such that each terminal is in a distinct part, and the total…

Data Structures and Algorithms · Computer Science 2017-11-20 Yixin Cao , Jianer Chen , Jia-Hao Fan

Prize-Collecting Steiner Tree (PCST) is a generalization of the Steiner Tree problem, a fundamental problem in computer science. In the classic Steiner Tree problem, we aim to connect a set of vertices known as terminals using the…

Data Structures and Algorithms · Computer Science 2024-05-08 Ali Ahmadi , Iman Gholami , MohammadTaghi Hajiaghayi , Peyman Jabbarzade , Mohammad Mahdavi

In this paper, we consider enumeration problems for edge-distinct and vertex-distinct Eulerian trails. Here, two Eulerian trails are \emph{edge-distinct} if the edge sequences are not identical, and they are \emph{vertex-distinct} if the…

Data Structures and Algorithms · Computer Science 2023-01-24 Kazuhiro Kurita , Kunihiro Wasa

We present space-efficient parallel strategies for two fundamental combinatorial search problems, namely, backtrack search and branch-and-bound, both involving the visit of an $n$-node tree of height $h$ under the assumption that a node can…

Data Structures and Algorithms · Computer Science 2014-03-27 Andrea Pietracaprina , Geppino Pucci , Francesco Silvestri , Fabio Vandin

Dual-tree algorithms are a widely used class of branch-and-bound algorithms. Unfortunately, developing dual-tree algorithms for use with different trees and problems is often complex and burdensome. We introduce a four-part logical split:…

Data Structures and Algorithms · Computer Science 2013-04-17 Ryan R. Curtin , William B. March , Parikshit Ram , David V. Anderson , Alexander G. Gray , Charles L. Isbell

Many state-of-the-art Segment Routing (SR) Traffic Engineering (TE) algorithms rely on Linear Program (LP)-based optimization. However, the poor scalability of the latter and the resulting high computation times impose severe restrictions…

Networking and Internet Architecture · Computer Science 2024-08-27 Alexander Brundiers , Timmy Schüller , Nils Aschenbruck

Many interesting computational problems can be reformulated in terms of decision trees. A natural classical algorithm is to then run a random walk on the tree, starting at the root, to see if the tree contains a node n levels from the root.…

Quantum Physics · Physics 2009-10-30 Edward Farhi , Sam Gutmann

We introduce an algorithm for generating a random sequence of fragmentation trees, which we call the ancestral branching algorithm. This algorithm builds on the recursive partitioning structure of a tree and gives rise to an associated…

Probability · Mathematics 2011-11-02 Harry Crane

In this paper we study the Steiner tree problem over a dynamic set of terminals. We consider the model where we are given an $n$-vertex graph $G=(V,E,w)$ with positive real edge weights, and our goal is to maintain a tree which is a good…

Data Structures and Algorithms · Computer Science 2016-06-27 Jakub Łącki , Jakub Oćwieja , Marcin Pilipczuk , Piotr Sankowski , Anna Zych

Finding a Steiner strongly $k$-arc-connected orientation is particularly relevant in network design and reliability, as it guarantees robust communication between a designated set of critical nodes. Kir\'aly and Lau (FOCS 2006) introduced a…

Discrete Mathematics · Computer Science 2025-11-05 Kristóf Bérczi , Florian Hörsch , András Imolay , Tamás Schwarcz

Fredman proposed in 1976 the following algorithmic problem: Given are a ground set $X$, some partial order $P$ over $X$, and some comparison oracle $O_L$ that specifies a linear order $L$ over $X$ that extends $P$. A query to $O_L$ has as…

Data Structures and Algorithms · Computer Science 2026-02-10 Ivor van der Hoog , Eva Rotenberg , Daniel Rutschmann

A searcher is tasked with exploring a graph with edge lengths and vertex weights, starting from a designated vertex. Initially, only the starting vertex is considered explored. At each step, the searcher adds an edge to the solution,…

Data Structures and Algorithms · Computer Science 2025-05-13 Svenja M. Griesbach , Felix Hommelsheim , Max Klimm , Kevin Schewior

The ancestral maximum-likelihood and phylogeography problems are two fundamental problems involving evolutionary studies. The ancestral maximum-likelihood problem involves identifying a rooted tree alongside internal node sequences that…

Data Structures and Algorithms · Computer Science 2023-08-15 Mohammad-Hadi Foroughmand-Araabi , Sama Goliaei , Kasra Alishahi

The Closest String Problem is an NP-hard problem that aims to find a string that has the minimum distance from all sequences that belong to the given set of strings. Its applications can be found in coding theory, computational biology, and…

Artificial Intelligence · Computer Science 2024-07-19 Alireza Abdi , Marko Djukanovic , Hesam Tahmasebi Boldaji , Hadis Salehi , Aleksandar Kartelj

Like many numerical methods, solvers for initial value problems (IVPs) on ordinary differential equations estimate an analytically intractable quantity, using the results of tractable computations as inputs. This structure is closely…

Numerical Analysis · Mathematics 2017-08-14 Michael Schober , Simo Särkkä , Philipp Hennig

Temporal graphs arise when modeling interactions that evolve over time. They usually come in several flavors, depending on the number of parameters used to describe the temporal aspects of the interactions: time of appearance, duration,…

Data Structures and Algorithms · Computer Science 2026-01-26 Guillaume Aubian , Filippo Brunelli , Feodor F Dragan , Guillaume Ducoffe , Michel Habib , Allen Ibiapina , Laurent Viennot

Given a graph $G = (V,E)$ and a subset $T \subseteq V$ of terminals, a \emph{Steiner tree} of $G$ is a tree that spans $T$. In the vertex-weighted Steiner tree (VST) problem, each vertex is assigned a non-negative weight, and the goal is to…

Data Structures and Algorithms · Computer Science 2019-05-07 Faryad Darabi Sahneh , Alon Efrat , Stephen Kobourov , Spencer Krieger , Richard Spence