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The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…

Discrete Mathematics · Computer Science 2015-03-19 Paul Bonsma

Current graph neural networks (GNNs) lack generalizability with respect to scales (graph sizes, graph diameters, edge weights, etc..) when solving many graph analysis problems. Taking the perspective of synthesizing graph theory programs,…

Machine Learning · Computer Science 2020-10-27 Hao Tang , Zhiao Huang , Jiayuan Gu , Bao-Liang Lu , Hao Su

Let ${\cal G}=(G,w)$ be a weighted simple finite connected graph, that is, let $G$ be a simple finite connected graph endowed with a function $w$ from the set of the edges of $G$ to the set of real numbers. For any subgraph $G'$ of $G$, we…

Combinatorics · Mathematics 2014-12-18 Elena Rubei

Suppose a finite, unweighted, combinatorial graph $G = (V,E)$ is the union of several (degree-)regular graphs which are then additionally connected with a few additional edges. $G$ will then have only a small number of vertices $v \in V$…

Combinatorics · Mathematics 2023-10-25 Tony Zeng

Complex networks or graphs are ubiquitous in sciences and engineering: biological networks, brain networks, transportation networks, social networks, and the World Wide Web, to name a few. Spectral graph theory provides a set of useful…

Statistics Theory · Mathematics 2019-01-23 Subhadeep Mukhopadhyay , Kaijun Wang

Graph learning from data represents a canonical problem that has received substantial attention in the literature. However, insufficient work has been done in incorporating prior structural knowledge onto the learning of underlying…

Machine Learning · Statistics 2019-04-23 Sandeep Kumar , Jiaxi Ying , José Vinícius de M. Cardoso , Daniel Palomar

A multigraph G is triangle decomposable if its edge set can be partitioned into subsets, each of which induces a triangle of G, and rationally triangle decomposable if its triangles can be assigned rational weights such that for each edge e…

Combinatorics · Mathematics 2015-04-03 Christina , Mynhardt , Christopher van Bommel

We propose a method for characterizing large complex networks by introducing a new matrix structure, unique for a given network, which encodes structural information; provides useful visualization, even for very large networks; and allows…

Disordered Systems and Neural Networks · Physics 2008-02-28 J. P. Bagrow , E. M. Bollt , J. D. Skufca , D. ben-Avraham

The Mapper algorithm is a popular tool for visualization and data exploration in topological data analysis. We investigate an inverse problem for the Mapper algorithm: Given a dataset $X$ and a graph $G$, does there exist a set of Mapper…

In the recent years, several polynomial algorithms of a dynamical nature have been proposed to address the graph isomorphism problem. In this paper we propose a generalization of an approach exposed in cond-mat/0209112 and find that this…

Computational Complexity · Computer Science 2007-05-23 Marats Golovkins

The logical depth of a graph $G$ is the minimum quantifier depth of a first order sentence defining $G$ up to isomorphism in the language of the adjacency and the equality relations. We consider the case that $G$ is a dissection of a convex…

Combinatorics · Mathematics 2007-05-23 Manuel Bodirsky , Mihyun Kang , Oleg Verbitsky

Shape-based regularization has proven to be a useful method for delineating objects within noisy images where one has prior knowledge of the shape of the targeted object. When a collection of possible shapes is available, the specification…

Computer Vision and Pattern Recognition · Computer Science 2014-05-05 Joshua C. Chang , Tom Chou

Construction of non-isomorphic cospectral graphs is a nontrivial problem in spectral graph theory specially for large graphs. In this paper, we establish that graph theoretical partial transpose of a graph is a potential tool to create…

Combinatorics · Mathematics 2018-08-13 Supriyo Dutta , Bibhas Adhikari

Geometric modeling by constraints leads to large systems of algebraic equations. This paper studies bipartite graphs underlaid by systems of equations. It shows how these graphs make possible to polynomially decompose these systems into…

Discrete Mathematics · Computer Science 2014-05-26 Samy Ait-Aoudia , Roland Jegou , Dominique Michelucci

Subgraph Isomorphism uses a small graph as a pattern to identify within a larger graph a set of vertices that have matching edges. This paper addresses a logic program written in Prolog for a specific relatively complex graph pattern for…

Logic in Computer Science · Computer Science 2026-01-14 Claire Y. Yin , Peter M. Kogge

We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…

Data Structures and Algorithms · Computer Science 2007-05-23 David Eppstein

Graph is a useful data structure to model various real life aspects like email communications, co-authorship among researchers, interactions among chemical compounds, and so on. Supporting such real life interactions produce a knowledge…

Data Structures and Algorithms · Computer Science 2016-11-11 Kifayat Ullah Khan , Waqas Nawaz , Young-Koo Lee

A mixed graph $G$ is a graph obtained from a simple undirected graph by orientating a subset of edges. $G$ is self-converse if it is isomorphic to the graph obtained from $G$ by reversing each directed edge. For two mixed graphs $G$ and $H$…

Combinatorics · Mathematics 2019-12-02 Wei Wang , Lihong Qiu , Jianguo Qian , Wei Wang

Unigraphs are graphs uniquely determined by their own degree sequence up to isomorphism. There are many subclasses of unigraphs such as threshold graphs, split matrogenic graphs, matroidal graphs, and matrogenic graphs. Unigraphs and these…

Data Structures and Algorithms · Computer Science 2019-04-23 Takashi Horiyama , Jun Kawahara , Shin-ichi Minato , Yu Nakahata

Subgraph reconfiguration is a family of problems focusing on the reachability of the solution space in which feasible solutions are subgraphs, represented either as sets of vertices or sets of edges, satisfying a prescribed graph structure…

Data Structures and Algorithms · Computer Science 2018-03-19 Tesshu Hanaka , Takehiro Ito , Haruka Mizuta , Benjamin Moore , Naomi Nishimura , Vijay Subramanya , Akira Suzuki , Krishna Vaidyanathan