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One of the challenges in online reinforcement learning (RL) is that the agent needs to trade off the exploration of the environment and the exploitation of the samples to optimize its behavior. Whether we optimize for regret, sample…

Machine Learning · Computer Science 2021-11-19 Jean Tarbouriech , Matteo Pirotta , Michal Valko , Alessandro Lazaric

Reconfigurable Intelligent Surfaces (RIS) show great promise in the realm of 6th generation (6G) wireless systems, particularly in the areas of localization and communication. Their cost-effectiveness and energy efficiency enable the…

Signal Processing · Electrical Eng. & Systems 2024-03-12 Han Yan , Hua Chen , Wei Liu , Songjie Yang , Gang Wang , Chau Yuen

We propose an efficient novel path sampling-based framework designed to accelerate the investigation of rare events in complex molecular systems. A key innovation is the shift from sampling restricted path ensemble distributions, as in…

Chemical Physics · Physics 2025-03-28 Gianmarco Lazzeri , Peter G. Bolhuis , Roberto Covino

In this work, we introduce the Resilient Projected Push-Pull (RP3) algorithm designed for distributed optimization in multi-agent cyber-physical systems with directed communication graphs and the presence of malicious agents. Our algorithm…

Systems and Control · Electrical Eng. & Systems 2024-07-10 Arif Kerem Dayı , Orhan Eren Akgün , Stephanie Gil , Michal Yemini , Angelia Nedić

We introduce the `nhppp' package for simulating events from one-dimensional non-homogeneous Poisson point processes (NHPPPs) in R fast and with a small memory footprint. We developed it to facilitate the sampling of event times in discrete…

Computation · Statistics 2024-05-30 Thomas A. Trikalinos , Yuliia Sereda

This letter proposes a novel mathematical framework for the statistical characterization of reconfigurable intelligent surface (RIS)-mounted high-altitude platform station (HAPS)-assisted MIMO systems over cascaded Rician fading channels.…

Signal Processing · Electrical Eng. & Systems 2026-04-29 Tayfun Yilmaz , Haci Ilhan , Ali Gorcin , Halim Yanikomeroglu

It is the first step for understanding how RNA structure folds from base sequences that to know how its secondary structure is formed. Traditional energy-based algorithms are short of precision, particularly for non-nested sequences, while…

Quantum Physics · Physics 2023-05-18 Ji Jiang , Qipeng Yan , Ye Li , Min Lu , Ziwei Cui , Menghan Dou , Qingchun Wang , Yu-Chun Wu , Guo-Ping Guo

Non-orthogonal multiple access (NOMA) technique is important for achieving a high data rate in next-generation wireless communications. A key challenge to fully utilizing the effectiveness of the NOMA technique is the optimization of the…

Information Theory · Computer Science 2024-10-28 Teppei Otsuka , Aohan Li , Hiroki Takesue , Kensuke Inaba , Kazuyuki Aihara , Mikio Hasegawa

We propose a general framework to extract microscopic interactions from raw configurations with deep neural networks. The approach replaces the modeling Hamiltonian by the neural networks, in which the interaction is encoded. It can be…

Computational Physics · Physics 2020-08-19 Lingxiao Wang , Yin Jiang , Kai Zhou

Interacting RNA complexes are studied via bicellular maps using a filtration via their topological genus. Our main result is a new bijection for RNA-RNA interaction structures and linear time uniform sampling algorithm for RNA complexes of…

Combinatorics · Mathematics 2014-04-15 Benjamin Mingming Fu , Hillary Siwei Han , Christian M. Reidys

Restricted Boltzmann Machines (RBMs) are widely used probabilistic undirected graphical models with visible and latent nodes, playing an important role in statistics and machine learning. The task of structure learning for RBMs involves…

Quantum Physics · Physics 2023-09-26 Liming Zhao , Aman Agrawal , Patrick Rebentrost

We present a sparse knowledge gradient (SpKG) algorithm for adaptively selecting the targeted regions within a large RNA molecule to identify which regions are most amenable to interactions with other molecules. Experimentally, such regions…

Optimization and Control · Mathematics 2015-08-10 Yan Li , Kristofer G. Reyes , Jorge Vazquez-Anderson , Yingfei Wang , Lydia M. Contreras , Warren B. Powell

Recent advances in deep reinforcement learning (deep RL) enable researchers to solve challenging control problems, from simulated environments to real-world robotic tasks. However, deep RL algorithms are known to be sensitive to the problem…

Robotics · Computer Science 2023-02-01 Joanne Taery Kim , Sehoon Ha

Random finite sets (RFSs) has been a fruitful area of research in recent years, yielding new approximate filters such as the probability hypothesis density (PHD), cardinalised PHD (CPHD), and multiple target multi-Bernoulli (MeMBer). These…

Systems and Control · Computer Science 2015-03-19 Jason L. Williams

Large communication networks, e.g. Internet of Things (IoT), are known to be vulnerable to co-channel interference. One possibility to address this issue is the use of orthogonal multiple access (OMA) techniques. However, due to a…

Information Theory · Computer Science 2020-03-20 Steven Kisseleff , Symeon Chatzinotas , Björn Ottersten

Protein translation is one of the most important processes in cell life but, despite being well understood biochemically, the implications of its intrinsic stochastic nature have not been fully elucidated. In this paper we develop a…

Biological Physics · Physics 2014-01-29 Luca Caniparoli , Pierangelo Lombardo

Background: We study the sparsification of dynamic programming folding algorithms of RNA structures. Sparsification applies to the mfe-folding of RNA structures and can lead to a significant reduction of time complexity. Results: We analyze…

Combinatorics · Mathematics 2012-02-07 Fenix W. D. Huang , Christian M. Reidys

The dynamics of molecules are governed by rare event transitions between long-lived (metastable) states. To explore these transitions efficiently, many enhanced sampling protocols have been introduced that involve using simulations with…

Chemical Physics · Physics 2022-09-30 Maaike M. Galama , Hao Wu , Andreas Krämer , Mohsen Sadeghi , Frank Noé

RNA design aims to identify RNA sequences that fold into a target secondary structure. This task is challenging in terms of computational efficiency. Most existing methods focus on either minimum free energy (MFE)-based or ensemble-based…

Biomolecules · Quantitative Biology 2026-03-04 Tianshuo Zhou , David H. Mathews , Liang Huang

In this paper, we investigate the performance of a reconfigurable intelligent surface (RIS) assisted large-scale network by characterizing the coverage probability and the average achievable rate using stochastic geometry. Considering the…

Signal Processing · Electrical Eng. & Systems 2022-08-19 Tianxiong Wang , Gaojie Chen , Mihai-Alin Badiu , Justin P. Coon