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The nature of the alignment with gaps corresponding to a longest common subsequence (LCS) of two independent iid random sequences drawn from a finite alphabet is investigated. It is shown that such an optimal alignment typically matches…

Probability · Mathematics 2016-04-22 C. Houdré , H. Matzinger

In this paper, we study the behaviour of the longest common substring for random subshifts of finite type (for dynamicists) or of the longest common substring for random sequences in random environments (for probabilists). We prove that,…

Dynamical Systems · Mathematics 2020-11-24 Jerome Rousseau

New algorithm for finding longest increasing subsequence is discussed. This algorithm is based on the ideas of idempotent mathematics and uses Max-Plus idempotent semiring. Problem of finding longest increasing sub- sequence is reformulated…

Data Structures and Algorithms · Computer Science 2014-09-11 Anatoly Rodionov

A maximal repetition, or run, in a string, is a maximal periodic substring whose smallest period is at most half the length of the substring. In this paper, we consider runs that correspond to a path on a trie, or in other words, on a…

Data Structures and Algorithms · Computer Science 2021-04-21 Ryo Sugahara , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

A grid poset -- or grid for short -- is a product of chains. We ask, what does a random linear extension of a grid look like? In particular, we show that the average "jump number," i.e., the number of times that two consecutive elements in…

Combinatorics · Mathematics 2007-05-23 Joshua Cooper

In 2013, Joerg Arndt recorded that the Fibonacci numbers count integer compositions where the first part is greater than the second, the third part is greater than the fourth, etc. We provide a new combinatorial proof that verifies his…

Combinatorics · Mathematics 2023-07-25 Brian Hopkins , Aram Tangboonduangjit

We consider the general problem of the Longest Common Subsequence (LCS) on weighted sequences. Weighted sequences are an extension of classical strings, where in each position every letter of the alphabet may occur with some probability.…

Computational Complexity · Computer Science 2020-07-21 Evangelos Kipouridis , Kostas Tsichlas

A pattern of a sequence is a sequence of integer indices with each index describing the order of first occurrence of the respective symbol in the original sequence. In a recent paper, tight general bounds on the block entropy of patterns of…

Information Theory · Computer Science 2007-11-15 Gil I. Shamir

A decomposition of a natural number n is a sequence of consecutive natural numbers that sums to n. We construct a one-to-one correspondence between the odd factors of a natural number and its decompositions. We study the decompositions by…

History and Overview · Mathematics 2007-05-23 Wai Yan Pong

The purpose of this paper is to study a statistic that is used to compare the similarity between two strings, which is first introduced by Michael Steele in 1982. It was proposed as an alternative to the length of the longest common…

Probability · Mathematics 2023-06-22 Ümit Işlak , Alperen Y. Özdemir

We establish new upper bounds for the length of runs of consecutive positive integers each with exactly $k$ divisors, where $k$ is a given positive integer of some special forms. Also we have found exact values of the maximum possible runs…

Number Theory · Mathematics 2018-11-14 Vasilii A. Dziubenko , Vladimir A. Letsko

We study the entropy of the distribution of the set R_n of vertices visited by a simple random walk on a graph with bounded degrees in its first n steps. It is shown that this quantity grows linearly in the expected size of R_n if the graph…

Probability · Mathematics 2010-07-13 David Windisch

This comprehensive survey examines the field of alphabetic codes, tracing their development from the 1960s to the present day. We explore classical alphabetic codes and their variants, analyzing their properties and the underlying…

Information Theory · Computer Science 2025-04-09 Roberto Bruno , Roberto De Prisco , Ugo Vaccaro

The work takes another look at the number of runs that a string might contain and provides an alternative proof for the bound. We also propose another stronger conjecture that states that, for a fixed order on the alphabet, within every…

Discrete Mathematics · Computer Science 2015-12-24 Maxime Crochemore , Robert Mercas

In this article we consider transient random walks on HNN extensions of finitely generated groups. We prove that the rate of escape w.r.t. some generalised word length exists. Moreover, a central limit theorem with respect to the…

Probability · Mathematics 2021-01-01 Lorenz A. Gilch

We look at the number $L(n)$ of $O$-sequences of length $n$. Recall that an $O$-sequence can be defined algebraically as the Hilbert function of a standard graded $k$-algebra, or combinatorially as the $f$-vector of a multicomplex. The…

Commutative Algebra · Mathematics 2019-04-23 Richard P. Stanley , Fabrizio Zanello

We explore partitions that lie in the intersection of several sets of classical interest: partitions with parts indivisible by $m$, appearing fewer than $m$ times, or differing by less than $m$. We find results on their behavior and…

Combinatorics · Mathematics 2019-11-13 William J. Keith

In the first part we associate a periodic sequence to a partition and study the connection the distribution of elements of uniform limit of the sequences. Then some facts of statistical independence of these limits are proved

Number Theory · Mathematics 2018-05-01 Milan Pasteka

We develop an experimental algorithm for the exact solving of the maximum independent set problem. The algorithm consecutively finds the maximal independent sets of vertices in an arbitrary undirected graph such that the next such set…

Data Structures and Algorithms · Computer Science 2016-03-02 Anatoly D. Plotnikov

In this paper, we study a combinatorial problem originating in the following conjecture of Erdos and Lemke: given any sequence of n divisors of n, repetitions being allowed, there exists a subsequence the elements of which are summing to n.…

Combinatorics · Mathematics 2012-08-14 Benjamin Girard