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How to represent the genetic code? Despite the fact that it is extensively known, the DNA mapping into proteins remains as one of the relevant discoveries of genetics. However, modern genomic signal processing usually requires converting…

Other Quantitative Biology · Quantitative Biology 2015-03-10 H. M. de Oliveira , N. S. Santos-Magalhaes

This effort examines the intersection of the emerging field of quantum computing and the more established field of evolutionary computation. The goal is to understand what benefits quantum computing might offer to computational intelligence…

Neural and Evolutionary Computing · Computer Science 2008-12-18 Donald A. Sofge

We discuss efficient quantum logic circuits which perform two tasks: (i) implementing generic quantum computations and (ii) initializing quantum registers. In contrast to conventional computing, the latter task is nontrivial because the…

Quantum Physics · Physics 2007-05-23 Vivek V. Shende , Stephen S. Bullock , Igor L. Markov

Recent years have witnessed the success of deep neural networks in many research areas. The fundamental idea behind the design of most neural networks is to learn similarity patterns from data for prediction and inference, which lacks the…

Machine Learning · Computer Science 2020-08-24 Shaoyun Shi , Hanxiong Chen , Weizhi Ma , Jiaxin Mao , Min Zhang , Yongfeng Zhang

This paper describes the software implementation of genetic algorithm for identifying and selecting most relevant results received during sequentially executed subject search operations. Simulated evolutionary process generates sustainable…

Information Retrieval · Computer Science 2015-04-17 V. K. Ivanov , P. I. Meskin

Generating molecules, both in a directed and undirected fashion, is a huge part of the drug discovery pipeline. Genetic algorithms (GAs) generate molecules by randomly modifying known molecules. In this paper we show that GAs are very…

Neural and Evolutionary Computing · Computer Science 2023-10-16 Austin Tripp , José Miguel Hernández-Lobato

Genetic algorithms are considered as an original way to solve problems, probably because of their generality and of their "blind" nature. But GAs are also unusual since the features of many implementations (among all that could be thought…

Artificial Intelligence · Computer Science 2011-08-24 Jean-Louis Dessalles

Over the past twenty years, artificial Gene Regulatory Networks (GRNs) have shown their capacity to solve real-world problems in various domains such as agent control, signal processing and artificial life experiments. They have also…

Neural and Evolutionary Computing · Computer Science 2018-07-17 Dennis G Wilson , Kyle Harrington , Sylvain Cussat-Blanc , Hervé Luga

A method for automatically finding a program (bytecode) realizing the given algorithm is developed. The algorithm is specified as a set of tests (input\_data) $ \rightarrow $ (output\_data). Genetic methods made it possible to find the…

Neural and Evolutionary Computing · Computer Science 2018-07-18 S. I. Khashin , S. E. Vaganov

Evolutionary computing (EC) is an exciting development in Computer Science. It amounts to building, applying and studying algorithms based on the Darwinian principles of natural selection. In this paper we briefly introduce the main…

Artificial Intelligence · Computer Science 2007-05-23 Aguston E. Eiben , Marc Schoenauer

Logic locking protects the integrity of hardware designs throughout the integrated circuit supply chain. However, recent machine learning (ML)-based attacks have challenged its fundamental security, initiating the requirement for the design…

Cryptography and Security · Computer Science 2023-05-04 Zeng Wang , Lilas Alrahis , Dominik Sisejkovic , Ozgur Sinanoglu

We study a class of growth algorithms for directed graphs that are candidate models for the evolution of genetic regulatory networks. The algorithms involve partial duplication of nodes and their links, together with innovation of new…

Molecular Networks · Quantitative Biology 2007-05-23 D. V. Foster , S. A. Kauffman , J. E. S. Socolar

This chapter presents methodological reflections on the necessity and utility of artificial intelligence in generative design. Specifically, the chapter discusses how generative design processes can be augmented by AI to deliver in terms of…

Artificial Intelligence · Computer Science 2023-10-16 Pirouz Nourian , Shervin Azadi , Roy Uijtendaal , Nan Bai

In this work we use multiple scattering in conjunction with a genetic algorithm to reliably determine the optimized photonic-crystal-based structure able to perform a specific optical task. The genetic algorithm operates on a population of…

Materials Science · Physics 2009-11-10 L. Sanchis , A. Hakansson , D. Lopez-Zenon , J. Bravo-Abad , J. Sanchez-Dehesa

Taking inspiration from biological evolution, we explore the idea of "Can deep neural networks evolve naturally over successive generations into highly efficient deep neural networks?" by introducing the notion of synthesizing new highly…

Computer Vision and Pattern Recognition · Computer Science 2017-02-08 Mohammad Javad Shafiee , Akshaya Mishra , Alexander Wong

We present and discuss the results of an experimental analysis in the design of Boolean networks by means of genetic algorithms. A population of networks is evolved with the aim of finding a network such that the attractor it reaches is of…

Neural and Evolutionary Computing · Computer Science 2011-02-01 Andrea Roli , Cristian Arcaroli , Marco Lazzarini , Stefano Benedettini

Logical relations widely exist in human activities. Human use them for making judgement and decision according to various conditions, which are embodied in the form of \emph{if-then} rules. As an important kind of cognitive intelligence, it…

Neural and Evolutionary Computing · Computer Science 2021-06-23 Gang Wang

Deontic logic is a very well researched branch of mathematical logic and philosophy. Various kinds of deontic logics are considered for different application domains like argumentation theory, legal reasoning, and acts in multi-agent…

Artificial Intelligence · Computer Science 2015-02-23 Ulrich Furbach , Claudia Schon , Frieder Stolzenburg

We investigate the use of a Genetic Algorithm (GA) to design a set of photonic crystals (PCs) in one and two dimensions. Our flexible design methodology allows us to optimize PC structures which are optimized for specific objectives. In…

Optics · Physics 2009-11-13 Joel Goh , Ilya Fushman , Dirk Englund , Jelena Vuckovic

The state-of-the-art error correcting codes are based on large random constructions (random graphs, random permutations, ...) and are decoded by linear-time iterative algorithms. Because of these features, they are remarkable examples of…

Disordered Systems and Neural Networks · Physics 2016-08-31 Silvio Franz , Michele Leone , Andrea Montanari , Federico Ricci-Tersenghi
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