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We simulate the compression of a two-component Lennard-Jones liquid at a variety of constant temperatures using a molecular dynamics algorithm in an isobaric-isothermal ensemble. The viscosity of the liquid increases with pressure,…

chem-ph · Physics 2009-10-22 Shelly L. Shumway , Andrew S. Clarke , Hannes Jónsson

The glass transition GT is usually thought of as a structural arrest that occurs during the cooling of a liquid, or sometimes a plastic crystal, trapping a metastable state of the system before it can recrystallize to stabler forms1. This…

Chemical Physics · Physics 2015-05-18 Shuai Wei , Isabella Gallino , Ralf Busch , C. Austen Angell

First shells of hydration and bulk solvent plays a crucial role in the folding of proteins. Here, the role of water in the dynamics of proteins has been investigated using a theoretical protein-solvent model and a statistical physics…

Soft Condensed Matter · Physics 2015-05-27 Olivier Collet

Molecular dynamics simulations are performed to study the temperature-dependent dynamics and structures of the hydration shells of elastin-like and collagen-like peptides. For both model peptides, it is consistently observed that, upon…

Soft Condensed Matter · Physics 2009-02-23 Michael Vogel

Interactions between actin, an anionic polyelectrolyte, and lysozyme, a cationic globular protein, have been examined using a combination of synchrotron small-angle x-ray scattering and molecular dynamics simulations. Lysozyme initially…

"Conventional" scenario of metastable melting in ordinary substances in the limit of zero temperature assumes that the melting curve reaches the matter zero isotherm ("cold curve"). The same is true for standard variant of one-component…

Plasma Physics · Physics 2007-05-23 Igor L. Iosilevski , Alexander Yu. Chigvintsev

We have found that the geometrically frustrated spin chain compound Ca3Co2O6 belonging to Ising like universality class with uniaxial anisotropy shows kinetic arrest of first order intermediate phase (IP) to ferrimagnetic (FIM) transition.…

Strongly Correlated Electrons · Physics 2016-06-22 Santanu De , Kranti Kumar , A. Banerjee , P. Chaddah

Measurements of chain conformation in proteins/polyelectrolytes complexes (lysozyme and PSSNa) show that the crossover observed between an open structure -a chain network crosslinked by the proteins, and a globular one - dense globules of ~…

Soft Condensed Matter · Physics 2009-03-31 Jérémie Gummel , Fabrice Cousin , François Boué

The thermodynamics of proteins indicate that folding/unfolding takes place either through stable intermediates or through a two-state process without intermediates. The rather short folding times of the two-state process indicate that…

Condensed Matter · Physics 2016-08-31 Audun Bakk , Johan S. Hoye , Alex Hansen , Kim Sneppen , Mogens Hogh Jensen

We investigate the gel formation from the equilibrium sol phase in a simple model that has the characteristics of (colloidal) gel-forming systems at a finite temperature. At low volume fraction and low temperatures, particles are linked by…

Soft Condensed Matter · Physics 2007-08-24 E. Del Gado , W. Kob

We report that protein confinement within nanoscopic vesicular compartments corresponds to a liquid-liquid phase transition with the protein/water within vesicle lumen interacting very differently than in bulk. We show this effect leads to…

Classical molecular-dynamics simulations have been carried out to investigate densification mechanisms in silicon dioxide thin films deposited on an amorphous silica surface, according to a simplified ion-beam assisted deposition (IBAD)…

Materials Science · Physics 2009-11-07 Alexis Lefevre , Laurent J. Lewis , Ludvik Martinu , Michael R. Wertheimer

We consider the dynamic wetting and dewetting processes of films and droplets of complex liquids on planar surfaces, focusing on the case of colloidal suspensions, where the particle interactions can be sufficiently attractive to cause…

Fluid Dynamics · Physics 2024-11-20 J. Zhang , D. N. Sibley , D. Tseluiko , A. J. Archer

Liquid-liquid phase separation (LLPS) of protein solutions is governed by highly complex protein-protein interactions. Nevertheless, it has been suggested that based on the extended law of corresponding states (ELCS), as proposed for…

Soft Condensed Matter · Physics 2023-02-08 Jan Hansen , Stefan U. Egelhaaf , Florian Platten

To support a new interpretation of the origin of the dynamic heterogeneity observed pervasively in fragile liquids as they approach their glass transition temperatures Tg, we demonstrate that the introduction of ~2 nm structural…

Disordered Systems and Neural Networks · Physics 2010-12-14 Kazuhide Ueno , C. Austen Angell

The solidity of glassy materials is believed to be due to the cage formed around each particle by its neighbors, but in reality the details of cage-formation remain elusive [1-4]. This cage starts to be formed at the onset…

Soft Condensed Matter · Physics 2020-12-02 Bo Li , Kai Lou , Walter Kob , Steve Granick

We study spin liquid phases of spin-5/2 alkaline earth atoms on a honeycomb lattice at finite temperatures. Our analysis is based on a Gutzwiller projection variational approach recast to a path-integral formalism. In the framework of a…

Quantum Gases · Physics 2013-10-15 P. Sinkovicz , A. Zamora , E. Szirmai , M. Lewenstein , G. Szirmai

Coexisting ferromagnetic (FM) and antiferromagnetic (AFM) phases over a range of temperature (T) and magnetic field (H), have been reported in many materials. The 1st order FM-AFM transition is completed over a broad T (or H) range; this is…

Strongly Correlated Electrons · Physics 2007-05-23 P. Chaddah , A. Banerjee , S. B. Roy

In-situ powder diffraction was used to study the annealing of dislocations in the archetypal hydrogen absorbers Pd and LaNi5. The relationship between dislocations and trapped hydrogen was explored using thermally induced desorption. It was…

Materials Science · Physics 2016-09-20 T. A. Webb , C. J. Webb , C. V. Tapia-Bastidas , E. MacA. Gray

During directional solidification of the solvent in a colloidal suspension, the colloidal particles segregate from the growing solid, forming high-particle-density regions with structure on a hierarchy of length scales ranging from that of…

Soft Condensed Matter · Physics 2011-03-09 Melissa Spannuth , S. G. J. Mochrie , S. S. L. Peppin , J. S. Wettlaufer
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