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Cellular automata are computers, similar to Turing machines. The main difference is that Turing machines use a one-dimensional tape, whereas cellular automata use a two-dimensional grid. The best-known cellular automaton is the Game of…

Cellular Automata and Lattice Gases · Physics 2025-01-10 Peter Turney

Many multicellular communities propagate signals in a directed manner via excitable waves. Cell-to-cell heterogeneity is a ubiquitous feature of multicellular communities, but the effects of heterogeneity on wave propagation are still…

Biological Physics · Physics 2020-04-22 Xiaoling Zhai , Joseph W. Larkin , Gürol M. Süel , Andrew Mugler

The fragmentation of filaments in molecular clouds has attracted a lot of attention as there seems to be a relation between the evolution of filaments and star formation. The study of the fragmentation process has been motivated by simple…

Astrophysics of Galaxies · Physics 2018-03-07 R. -A. Chira , J. Kainulainen , J. C. Ibàñez-Mejía , Th. Henning , M. -M. Mac Low

Here I describe a view of the evolution of cellular automata that allows to operate on larger structures. Instead of calculating the next state of all cells in one step, the method here developed uses a time slice that can proceed at…

Cellular Automata and Lattice Gases · Physics 2010-07-20 Markus Redeker

We propose a novel density based numerical method for uncertainty propagation under certain partial differential equation dynamics. The main idea is to translate them into objects that we call cellular probabilistic automata and to evolve…

Numerical Analysis · Mathematics 2013-02-06 Dominic Kohler , Johannes Müller , Utz Wever

We study a two-dimensional cellular automaton (CA), called Diffusion Rule (DR), which exhibits diffusion-like dynamics of propagating patterns. In computational experiments we discover a wide range of mobile and stationary localizations…

Formal Languages and Automata Theory · Computer Science 2015-05-13 Genaro J. Martinez , Andrew Adamatzky , Harold V. McIntosh

We explore some aspects of phase transitions in cellular automata. We start recalling the standard formulation of statistical mechanics of discrete systems (Ising model), illustrating the Monte Carlo approach as Markov chains and stochastic…

Statistical Mechanics · Physics 2023-12-05 Franco Bagnoli , Raul Rechtman

In a uniform radio-frequency (RF) plasma between a large electrode pair, the addition of an axial magnetic field induces diverse longitudinal filaments. To reveal its pattern dynamics, we conduct two-dimensional (2D) Particle-In-Cell (PIC)…

Plasma Physics · Physics 2025-05-28 Huidong Huang , Jian Chen , Zhibin Wang

Cellular tissue behavior is a multiscale problem. At the cell level, out of equilibrium, biochemical reactions drive physical cell-cell interactions in a typical active matter process. Cell modeling computer simulations are a robust tool to…

Soft Condensed Matter · Physics 2021-02-09 Emanuel F. Teixeira , Heitor C. M. Fernandes , Leonardo G. Brunnet

We investigate one-dimensional elementary probabilistic cellular automata (PCA) whose dynamics in first-order mean-field approximation yields discrete logisticlike growth models for a single-species unstructured population with…

Statistical Mechanics · Physics 2017-05-24 J. Ricardo G. Mendonça , Yeva Gevorgyan

The spatiotemporal coordination and regulation of cell proliferation is fundamental in many aspects of development and tissue maintenance. Cells have the ability to adapt their division rates in response to mechanical constraints, yet we do…

Quantitative Methods · Quantitative Biology 2024-04-25 Carles Falcó , Daniel J. Cohen , José A. Carrillo , Ruth E. Baker

We show how to construct a deterministic nearest-neighbour cellular automaton (CA) with four states which emulates diffusion on a one-dimensional lattice. The pseudo-random numbers needed for directing random walkers in the diffusion…

Cellular Automata and Lattice Gases · Physics 2023-12-19 Henryk Fukś

We aim to identify the spatial distribution of vegetation and its growth dynamics with the purpose of obtaining a qualitative assessment of vegetation characteristics tied to its condition, productivity and health, and to land degradation.…

Statistical Mechanics · Physics 2024-09-16 Hediye Yarahmadi , Yves Desille , John Goold , Francesca Pietracaprina

The research field of Artificial Life studies how life-like phenomena such as autopoiesis, agency, or self-regulation can self-organize in computer simulations. In cellular automata (CA), a key open-question has been whether it it is…

Multiagent Systems · Computer Science 2024-02-19 Gautier Hamon , Mayalen Etcheverry , Bert Wang-Chak Chan , Clément Moulin-Frier , Pierre-Yves Oudeyer

We show techniques of analyzing complex dynamics of cellular automata (CA) with chaotic behaviour. CA are well known computational substrates for studying emergent collective behaviour, complexity, randomness and interaction between order…

Cellular Automata and Lattice Gases · Physics 2012-03-29 Genaro J. Martinez , Andrew Adamatzky , Ramon Alonso-Sanz

In this paper, we report on the generation and propagation of traveling pulses in a homogeneous network of diffusively coupled, excitable, slow-fast dynamical neurons. The spatially extended system is modelled using the nearest neighbor…

Pattern Formation and Solitons · Physics 2024-06-19 Arnab Mondal , Argha Mondal , M. A. Aziz-Alaoui , Ranjit Kumar Upadhyay , Sanjeev Kumar Sharma , Chris G. Antonopoulos

Active forces occurring within cells can drive crucial biological processes that involve spontaneous organization and shape change, such as cell division. Motivated by recent in vitro experiments of nematic droplets of cytoskeletal…

Soft Condensed Matter · Physics 2021-02-16 Fabian Jan Schwarzendahl , Pierre Ronceray , Kimberly L. Weirich , Kinjal Dasbiswas

Evolving one-dimensional cellular automata (CAs) with genetic algorithms has provided insight into how improved performance on a task requiring global coordination emerges when only local interactions are possible. Two approaches that can…

adap-org · Physics 2007-05-23 Justin Werfel , Melanie Mitchell , James P. Crutchfield

Hybrid models of chemotaxis combine agent-based models of cells with partial differential equation models of extracellular chemical signals. In this paper, travelling wave properties of hybrid models of bacterial chemotaxis are…

Biological Physics · Physics 2013-02-13 Benjamin Franz , Chuan Xue , Kevin J. Painter , Radek Erban

Cellular automata (CA) provide a minimal formalism for investigating how simple local interactions generate rich spatiotemporal behavior in domains as diverse as traffic flow, ecology, tissue morphogenesis and crystal growth. However,…

Machine Learning · Computer Science 2025-06-24 Jaime A. Berkovich , Noah S. David , Markus J. Buehler