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Related papers: Mg spin affects adenosinetriphosphate activity

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FoF1-ATP synthase is the enzyme that provides the 'chemical energy currency' adenosine triphosphate, ATP, for living cells. The formation of ATP is accomplished by a stepwise internal rotation of subunits within the enzyme. Briefly, proton…

Biomolecules · Quantitative Biology 2009-11-13 N. Zarrabi , S. Ernst , M. G. Dueser , A. Golovina-Leiker , W. Becker , R. Erdmann , S. D. Dunn , M. Borsch

Recently experiments have shown very significant spin activity in biological molecules such as DNA, proteins, oligopeptides and aminoacids. Such molecules have in common their chiral structure, time reversal symmetry and the absence of…

Mesoscale and Nanoscale Physics · Physics 2020-07-29 Juan Daniel Torres , Raul Hidalgo , Solmar Varela , Ernesto Medina

We present an active learning framework for efficiently generating training data for machine-learned interatomic potentials (MLIPs). The method combines local entropy-driven molecular dynamics with global dataset-aware filtering: a…

Materials Science · Physics 2026-05-21 Meiyan Wang , Rishi Rao , Li Zhu

Glycerol titration distinguished from free water the local hydration shell involved in ATPase transition from active to inactive, with cooperativity for water n=16. Rat brain cortex: NE-stimulated and its basal AC in the absence of free…

Other Quantitative Biology · Quantitative Biology 2012-08-29 Alfred Bennun

The motility of cilia and flagella is driven by thousands of dynein motors that hydrolyze adenosine triphosphate (ATP). Despite decades of genetic, biochemical, structural and biophysical studies, some aspects of ciliary motility remain…

Biological Physics · Physics 2015-12-22 Daniel T. N. Chen , Michael Heymann , Seth Fraden , Daniela Nicastro , Zvonimir Dogic

In this work, we study the spin dynamics of Mn12-acetate molecules in the regime of thermally assisted tunneling. In particular, we describe the system in the presence of a strong transverse magnetic field. Similar to recent experiments,…

Mesoscale and Nanoscale Physics · Physics 2009-10-31 Teemu Pohjola , Herbert Schoeller

We investigate optically induced ultrafast magnetization dynamics in [Co(0.5 nm)/Pd(1 nm)]x5/NiFe(t) exchange-spring samples with tilted perpendicular magnetic anisotropy using a time-resolved magneto-optical Kerr effect magnetometer. The…

Subtle changes in chemical bonds may result in dramatic revolutions in magnetic properties in solid state materials. MnPt5P, a new derivative of the rare-earth-free ferromagnetic MnPt5As, was discovered and is presented in this work. MnPt5P…

Materials Science · Physics 2020-06-23 Xin Gui , Ryan A. Klein , Craig M. Brown , Weiwei Xie

F1-ATPase catalyses ATP hydrolysis and converts the cellular chemical energy into mechanical rotation. The hydrolysis reaction in F1-ATPase does not follow the widely believed Michaelis-Menten mechanism. Instead, the hydrolysis mechanism…

Genomics · Quantitative Biology 2007-05-23 Ming S. Liu , B. D. Todd , Richard J. Sadus

The central-spin problem, in which an electron spin interacts with a nuclear spin bath, is a widely studied model of quantum decoherence. Dynamic nuclear polarization (DNP) occurs in central spin systems when electronic angular momentum is…

The properties of quantum systems interacting with their environment, commonly called open quantum systems, can be strongly affected by this interaction. While this can lead to unwanted consequences, such as causing decoherence in qubits…

We investigate the role of topology and distortions in the quantum dynamics of magnetic molecules, using a cyclic spin system as reference. We consider three variants of antiferromagnetic molecular ring, i.e. Cr$_8$, Cr$_7$Zn and Cr$_7$Ni,…

Mesoscale and Nanoscale Physics · Physics 2009-11-10 S. Carretta , P. Santini , G. Amoretti , M. Affronte , A. Ghirri , I. Sheikin , S. Piligkos , G. Timco , R. E. P. Winpenny

We present experimental data and associated theory for correlations in a series of experiments involving repeated Landau-Zener sweeps through the crossing point of a singlet state and a spin aligned triplet state in a GaAs double quantum…

The Zeeman-split spin states of a single quantum dot can be used together with its optical trion transitions to form a spin-photon interface between a stationary (the spin) and a flying (the photon) quantum bit. Besides long coherence times…

Mesoscale and Nanoscale Physics · Physics 2021-10-26 Hendrik Mannel , Jens Kerski , Pia Lochner , Marcel Zöllner , Andreas D. Wieck , Arne Ludwig , Axel Lorke , Martin Geller

First principles calculations based on density functional theory (DFT) are performed to study the electronic properties of Mg acceptors in AlN at the presence of oxygen. It is found that Mg and O tend to form complexes like Mg-O, Mg$_2$-O,…

Computational Physics · Physics 2007-09-18 R. Q. Wu , Y. P. Feng

Polymerization dynamics of single actin filaments is investigated theoretically using a stochastic model that takes into account the hydrolysis of ATP-actin subunits, the geometry of actin filament tips, the lateral interactions between the…

Soft Condensed Matter · Physics 2009-11-11 Evgeny B. Stukalin , Anatoly B. Kolomeisky

The intrinsic dynamics of most proteins are central to their function. Protein tyrosine kinases such as Abl1 undergo significant conformational changes that modulate their activity in response to different stimuli. These conformational…

Biological Physics · Physics 2025-08-12 Gabriel Monteiro da Silva , Kyle Lam , David C. Dalgarno , Brenda M. Rubenstein

Electron spin relaxation in paramagnetic Ga(Mn)As quantum wells is studied via the fully microscopic kinetic spin Bloch equation approach where all the scatterings, such as the electron-impurity, electron-phonon, electron-electron Coulomb,…

Materials Science · Physics 2009-04-02 J. H. Jiang , Y. Zhou , T. Korn , C. Schüller , M. W. Wu

We add the magnetic degrees of freedom to the widely used Gaussian Approximation Potential of machine learning (ML) and present a model that describes the potential energy surface of a crystal based on the atomic coordinates as well as…

Materials Science · Physics 2026-04-13 Yuqiang Gao , Menno Bokdam , Paul J. Kelly

We present a mode-coupling theory (MCT) for the high-density dynamics of two-dimensional spherical active Brownian particles (ABP). The theory is based on the integration-through-transients (ITT) formalism and hence provides a starting…

Soft Condensed Matter · Physics 2017-12-20 Alexander Liluashvili , Jonathan Onody , Thomas Voigtmann