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Absorption imaging of ultracold atoms is the foundation for quantitative extraction of information from experiments with ultracold atoms. Due to the limited exposure time available in these systems, the signal-to-noise ratio is largest for…

In this paper, a method for Automatic Image Registration (AIR) through histogram is proposed. Automatic image registration is one of the crucial steps in the analysis of remotely sensed data. A new acquired image must be transformed, using…

Computer Vision and Pattern Recognition · Computer Science 2014-02-25 V. Karthikeyan

Multi-modality (or multi-channel) imaging is becoming increasingly important and more widely available, e.g. hyperspectral imaging in remote sensing, spectral CT in material sciences as well as multi-contrast MRI and PET-MR in medicine.…

Image and Video Processing · Electrical Eng. & Systems 2020-12-25 Leon Bungert , Matthias J. Ehrhardt

Correlative imaging workflows are now widely used in bioimaging and aims to image the same sample using at least two different and complementary imaging modalities. Part of the workflow relies on finding the transformation linking a source…

Quantitative Methods · Quantitative Biology 2021-08-30 Guillaume Potier , Frédéric Lavancier , Stephan Kunne , Perrine Paul-Gilloteaux

The paper adapts the large deformation diffeomorphic metric mapping framework for image registration to the indirect setting where a template is registered against a target that is given through indirect noisy observations. The registration…

Numerical Analysis · Mathematics 2019-11-06 Chong Chen , Ozan Öktem

Physics-inspired regularization is desired for intra-patient image registration since it can effectively capture the biomechanical characteristics of anatomical structures. However, a major challenge lies in the reliance on physical…

Computer Vision and Pattern Recognition · Computer Science 2024-07-08 Anna Reithmeir , Lina Felsner , Rickmer Braren , Julia A. Schnabel , Veronika A. Zimmer

Objective: To develop an automatic image normalization algorithm for intensity correction of images from breast dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) acquired by different MRI scanners with various imaging…

Computer Vision and Pattern Recognition · Computer Science 2018-07-09 Jun Zhang , Ashirbani Saha , Brian J. Soher , Maciej A. Mazurowski

Multi-modal image registration is a challenging problem that is also an important clinical task for many real applications and scenarios. As a first step in analysis, deformable registration among different image modalities is often…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Fengze Liu , Jinzheng Cai , Yuankai Huo , Chi-Tung Cheng , Ashwin Raju , Dakai Jin , Jing Xiao , Alan Yuille , Le Lu , ChienHung Liao , Adam P Harrison

This document outlines a tutorial to get started with medical image registration using the open-source package DeepReg. The basic concepts of medical image registration are discussed, linking classical methods to newer methods using deep…

Image and Video Processing · Electrical Eng. & Systems 2020-09-08 N. Montana Brown , Y. Fu , S. U. Saeed , A. Casamitjana , Z. M. C. Baum , R. Delaunay , Q. Yang , A. Grimwood , Z. Min , E. Bonmati , T. Vercauteren , M. J. Clarkson , Y. Hu

We present a fast learning-based algorithm for deformable, pairwise 3D medical image registration. Current registration methods optimize an objective function independently for each pair of images, which can be time-consuming for large…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Guha Balakrishnan , Amy Zhao , Mert R. Sabuncu , John Guttag , Adrian V. Dalca

The automatic registration of noninvasive second-harmonic generation microscopy to hematoxylin and eosin slides is a highly desired, yet still unsolved problem. The task is challenging because the second-harmonic images contain only partial…

Computer Vision and Pattern Recognition · Computer Science 2024-09-25 Marek Wodzinski , Henning Müller

We study the problem of image registration in the finite-resolution regime and characterize the error probability of algorithms as a function of properties of the transformation and the image capture noise. Specifically, we define a…

Information Theory · Computer Science 2020-01-14 Ravi Kiran Raman , Lav R. Varshney

Diffeomorphic deformable image registration is crucial in many medical image studies, as it offers unique, special properties including topology preservation and invertibility of the transformation. Recent deep learning-based deformable…

Computer Vision and Pattern Recognition · Computer Science 2021-03-02 Tony C. W. Mok , Albert C. S. Chung

Image registration is the process of transforming different sets of data into one coordinate system and is required for various remote sensing applications like change detection, image fusion, and other related areas. The effect of…

Computer Vision and Pattern Recognition · Computer Science 2013-03-28 Arun P. V. , Dr. S. K. Katiyar

An important topic in medical research is the process of improving the images obtained from medical devices. As a consequence, there is also a need to improve medical image resolution and analysis. Another issue in this field is the large…

Image and Video Processing · Electrical Eng. & Systems 2023-05-26 Elena-Simona Apostol , Ciprian-Octavian Truică

The interpretation of prostate MRI suffers from low agreement across radiologists due to the subtle differences between cancer and normal tissue. Image registration addresses this issue by accurately mapping the ground-truth cancer labels…

Deep learning has emerged as a strong alternative for classical iterative methods for deformable medical image registration, where the goal is to find a mapping between the coordinate systems of two images. Popular classical image…

Computer Vision and Pattern Recognition · Computer Science 2024-12-03 Joel Honkamaa , Pekka Marttinen

Recent developments in the registration of histology and micro-computed tomography ({\mu}CT) have broadened the perspective of pathological applications such as virtual histology based on {\mu}CT. This topic remains challenging because of…

Objective: Evaluate and compare multiple mechanics-based and traditional regularization strategies within a variational image registration framework for quasi-static ultrasound elastography. Methods:We reformulate a previously proposed…

Numerical Analysis · Mathematics 2025-08-27 Olalekan A. Babaniyi , Rebecca Rodrigues , Michael S. Richards

Registration is a fundamental task in medical image analysis which can be applied to several tasks including image segmentation, intra-operative tracking, multi-modal image alignment, and motion analysis. Popular registration tools such as…

Computer Vision and Pattern Recognition · Computer Science 2019-10-07 Wentao Zhu , Andriy Myronenko , Ziyue Xu , Wenqi Li , Holger Roth , Yufang Huang , Fausto Milletari , Daguang Xu