English
Related papers

Related papers: Does reaction-diffusion support the duality of fra…

200 papers

There are many positive and negative factors present in the predator-prey interaction which affect the net growth of the species. Fear of predation is one such factor that creates psychological stress in a prey species, which causes a…

Populations and Evolution · Quantitative Biology 2025-03-25 Sangeeta Saha , Swadesh Pal , Roderick Melnik

The outcome of competition among species is influenced by the spatial distribution of species and effects such as demographic stochasticity, immigration fluxes, and the existence of preferred habitats. We introduce an individual-based model…

Populations and Evolution · Quantitative Biology 2010-07-19 Simone Pigolotti , Massimo Cencini

Multi-species distribution modeling, which relates the occurrence of multiple species to environmental variables, is an important tool used by ecologists for both predicting the distribution of species in a community and identifying the…

Applications · Statistics 2015-09-17 Francis K. C. Hui , David I. Warton , Scott D. Foster

Linked beneficial and deleterious mutations are known to decrease the fixation probability of a favorable mutation in large asexual populations. While the hindering effect of strongly deleterious mutations on adaptive evolution has been…

Populations and Evolution · Quantitative Biology 2022-03-22 Kavita Jain

Nonparametric estimation of the conditional distribution of a response given high-dimensional features is a challenging problem. It is important to allow not only the mean but also the variance and shape of the response density to change…

Machine Learning · Statistics 2013-12-05 Francesca Petralia , Joshua Vogelstein , David B. Dunson

This paper develops and analyzes a diffusion-advection model coupling population dynamics with toxicant transport, incorporating a boundary protection zone. For both upstream and downstream protection zone configurations, we investigate the…

Populations and Evolution · Quantitative Biology 2025-08-05 Jing Gao , Xiaoli Wang , Guohong Zhang

We present a spatially-extended system of chemical reactions exhibiting adaptation to time-dependent influxes of reactants. Here adaptation is defined as improved reproductive success, namely the ability of one of the many locally stable…

Statistical Mechanics · Physics 2025-12-02 Olivier Rivoire , Guy Bunin

We consider a spatially distributed population dynamics model with excitable predator-prey dynamics, where species propagate in space due to their taxis with respect to each other's gradient in addition to, or instead of, their diffusive…

Pattern Formation and Solitons · Physics 2009-11-10 V. N. Biktashev , J. Brindley , A. V. Holden , M. A. Tsyganov

Diffusion models are a class of generative models that serve to establish a stochastic transport map between an empirically observed, yet unknown, target distribution and a known prior. Despite their remarkable success in real-world…

Machine Learning · Computer Science 2025-03-13 Puheng Li , Zhong Li , Huishuai Zhang , Jiang Bian

Realistic examples of reaction-diffusion phenomena governing spatial and spatiotemporal pattern formation are rarely isolated systems, either chemically or thermodynamically. However, even formulations of `open' reaction-diffusion systems…

Pattern Formation and Solitons · Physics 2021-05-14 Andrew L. Krause , Václav Klika , Philip K. Maini , Denis Headon , Eamonn A. Gaffney

One of the most fascinating phenomena observed in reaction-diffusion systems is the emergence of segregated solutions, i.e. population densities with disjoint supports. We analyse such a reaction cross-diffusion system. In order to prove…

Analysis of PDEs · Mathematics 2017-11-16 José A. Carrillo , Simone Fagioli , Filippo Santambrogio , Markus Schmidtchen

In many scientific contexts, different investigators experiment with or observe different variables with data from a domain in which the distinct variable sets might well be related. This sort of fragmentation sometimes occurs in molecular…

Artificial Intelligence · Computer Science 2019-09-05 Shuyan Wang

In this work, we study the dynamics of a spatially heterogeneous single population model with the memory effect and nonlinear boundary condition. By virtue of the implicit function theorem and Lyapunov-Schmidt reduction, spatially…

Dynamical Systems · Mathematics 2024-03-25 Quanli Ji , Ranchao Wu , Tonghua Zhang

Diffusive transport is a universal phenomenon, throughout both biological and physical sciences, and models of diffusion are routinely used to interrogate diffusion-driven processes. However, most models neglect to take into account the…

Quantitative Methods · Quantitative Biology 2015-10-28 Paul R. Taylor , Christian A. Yates , Matthew J. Simpson , Ruth E. Baker

We introduce a new model for large scale evolution and extinction in which species are organized into food chains. The system evolves by two processes: origination/speciation and extinction. In the model, extinction of a given species can…

Statistical Mechanics · Physics 2007-05-23 Luis A. N. Amaral , Martin Meyer

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

Populations and Evolution · Quantitative Biology 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

This paper develops tools to characterize how species are affected by environmental variability, based on a functional single index model relating a response such as growth rate or survival to environmental conditions. In ecology, the…

Methodology · Statistics 2019-12-17 Zi Ye , Giles Hooker , Stephen Ellner

Natural ecosystems are characterized by striking diversity of form and functions and yet exhibit deep symmetries emerging across scales of space, time and organizational complexity. Species-area relationships and species-abundance…

A fractional reaction-diffusion equation is derived from a continuous time random walk model when the transport is dispersive. The exit from the encounter distance, which is described by the algebraic waiting time distribution of jump…

Statistical Mechanics · Physics 2009-11-10 Kazuhiko Seki , Mariusz Wojcik , M. Tachiya

We study a spatial (two-dimensional) Rosenzweig-MacArthur model under the following assumptions: $(1)$ prey movement follows a nonlinear diffusion, $(2)$ preys have a refuge zone (sometimes called "protection zone") where predators cannot…

Analysis of PDEs · Mathematics 2020-10-21 Leoncio Rodriguez Quinones , Jia Zhao , Luis Gordillo