Related papers: Forbidden substrings on weighted alphabets

In this document we achieve exact and asymptotic enumeration of words, compositions over a finite group, and/or integer compositions characterized by local restrictions and, separately, subsequence pattern avoidance. We also count…

Contrary to the expectation arising from the tanglegram Kuratowski theorem of \'E. Czabarka, L.A. Sz\'ekely and S. Wagner [SIAM J. Discrete Math. 31(3): 1732--1750, (2017)], we construct an infinite antichain of planar tanglegrams with…

A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011].…

This paper investigates the number of quantum queries made to solve the problem of reconstructing an unknown string from its substrings in a certain query model. More concretely, the goal of the problem is to identify an unknown string $S$…

In descending generality I survey: five partial orderings of graphs, the induced-subgraph ordering, and examples like perfect, threshold, and mock threshold graphs. The emphasis is on how the induced subgraph ordering differs from other…

We consider the problem of binary string reconstruction from the multiset of its substring compositions, i.e., referred to as the substring composition multiset, first introduced and studied by Acharya et al. We introduce a new algorithm…

In this note, extending some results of Erdos, Frankl, Rodl, Alexeev, Bollobas and Thomason we determine asymptotically the number of graphs which do not contain certain large subgraphs. In particular, if H_1,...,H_n,... are graphs with…

A weakly constrained code is a collection of finite-length strings over a finite alphabet in which certain substrings or patterns occur according to some prescribed frequencies. Buzaglo and Siegel (ITW 2017) gave a construction of weakly…

We construct subsets of Euclidean space of large Hausdorff dimension and full Minkowski dimension that do not contain nontrivial patterns described by the zero sets of functions. The results are of two types. Given a countable collection of…

Brandenburg and (implicitly) Dejean introduced the concept of repetition threshold: the smallest real number alpha such that there exists an infinite word over a k-letter alphabet that avoids beta-powers for all beta>alpha. We generalize…

We say that a word $w$ on a totally ordered alphabet avoids the word $v$ if there are no subsequences in $w$ order-equivalent to $v$. In this paper we suggest a new approach to the enumeration of words on at most $k$ letters avoiding a…

Babson and Steingr\'{\i}msson introduced generalized permutation patterns that allow the requirement that two adjacent letters in a pattern must be adjacent in the permutation. We consider n-permutations that avoid the generalized pattern…

Recently, Babson and Steingrimsson (see [BS]) introduced generalized permutations patterns that allow the requirement that two adjacent letters in a pattern must be adjacent in the permutation. We study generating functions for the number…

Let H be a connected bipartite graph with n nodes and m edges. We give an O(nm) time algorithm to decide whether H is an interval bigraph. The best known algorithm has time complexity O(nm^6(m + n) \log n) and it was developed in 1997 [18].…

A universal cycle for a set S of combinatorial objects is a cyclic sequence of length |S| that contains a representative of each element in S exactly once as a substring. Despite the many universal cycle constructions known in the…

A border of a string is a non-empty proper prefix of the string that is also a suffix. A string is unbordered if it has no border. The longest unbordered factor is a fundamental notion in stringology, closely related to string periodicity.…

We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…

We relate the computational complexity of finite strings to universal representations of their underlying symmetries. First, Boolean functions are classified using the universal covering topologies of the circuits which enumerate them. A…

We generalize the problem of reconstructing strings from their substring compositions first introduced by Acharya et al. in 2015 motivated by polymer-based advanced data storage systems utilizing mass spectrometry. Namely, we see strings as…

We apply model theoretic methods to the problem of existence of countable universal graphs with finitely many forbidden connected subgraphs. We show that to a large extent the question reduces to one of local finiteness of an…