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Sensory systems take continuously varying stimuli as their input and encode features relevant for the organism's survival into a sequence of action potentials - spike trains. The full dynamic range of complex dynamical inputs has to be…

Neurons and Cognition · Quantitative Biology 2011-03-03 Ingrid M. Esteves , Nelson M. Fernandes , Roland Köberle

Over the brief time intervals available for processing retinal output, roughly 50 to 300 msec, the number of extra spikes generated by individual ganglion cells can be quite variable. Here, computer-generated spike trains were used to…

Neurons and Cognition · Quantitative Biology 2007-09-14 Garrett T. Kenyon

Our knowledge of the sensory world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant…

Neurons and Cognition · Quantitative Biology 2007-05-23 Ilya Nemenman , Geoffrey D. Lewen , William Bialek , Rob R. de Ruyter van Steveninck

In many animal sensory pathways, the transformation from external stimuli to spike trains is essentially deterministic. In this context, a new mathematical framework for coding and reconstruction, based on a biologically plausible model of…

Neurons and Cognition · Quantitative Biology 2019-08-01 Anik Chattopadhyay , Arunava Banerjee

How natural communication sounds are spatially represented across the inferior colliculus, the main center of convergence for auditory information in the midbrain, is not known. The neural representation of the acoustic stimuli results from…

Neurons and Cognition · Quantitative Biology 2016-07-01 Dominika Lyzwa , Florentin Wörgötter

Retinal circuitry transforms spatiotemporal patterns of light into spiking activity of ganglion cells, which provide the sole visual input to the brain. Recent advances have led to a detailed characterization of retinal activity and…

Neurons and Cognition · Quantitative Biology 2016-05-12 Vicente Botella-Soler , Stéphane Deny , Olivier Marre , Gašper Tkačik

Sensory stimuli in animals are encoded into spike trains by neurons, offering advantages such as sparsity, energy efficiency, and high temporal resolution. This paper presents a signal processing framework that deterministically encodes…

Neural and Evolutionary Computing · Computer Science 2024-08-15 Anik Chattopadhyay , Arunava Banerjee

A computational theory for classification of natural biosonar targets is developed based on the properties of an example stimulus ensemble. An extensive set of echoes (84 800) from four different foliages was transcribed into a spike code…

Biological Physics · Physics 2007-05-23 Rolf Mueller

We dynamically analyze our experimental results on the motion sensitive spiking H1 neuron of the fly's visual system. We find that the fly uses an alphabet composed of a few letters to encode the information contained in the stimulus. The…

Neurons and Cognition · Quantitative Biology 2007-05-23 M. S. Baptista , Celso Grebogi , Roland Köberle

We consider the information transmission problem in neurons and its possible implications for learning in neural networks. Our approach is based on recent developments in statistical physics and complexity science. Combining sensory…

Neurons and Cognition · Quantitative Biology 2025-09-30 Siddharth Kackar

We construct a model that predicts the statistical properties of spike trains generated by a sensory neuron. The model describes the combined effects of the neuron's intrinsic properties, the noise in the surrounding, and the external…

Biological Physics · Physics 2009-10-31 N. Brenner , O. Agam , W. Bialek , R. de Ruyter van Steveninck

Neurophysiologists are nowadays able to record from a large number of extracellular electrodes and to extract, from the raw data, the sequences of action potentials or spikes generated by many neurons. Unfortunately these ''many neurons''…

Applications · Statistics 2026-04-22 Pierre Charitat , Ségolen Geffray , Christophe Pouzat

The hippocampal system contains neural populations that encode an animal's position and velocity as it navigates through space. Here, we show that such populations can embed two codes within their spike trains: a firing rate code (R)…

Neural and Evolutionary Computing · Computer Science 2019-12-25 Ryan Grgurich , Hugh T. Blair

A spiking neuron ``computes'' by transforming a complex dynamical input into a train of action potentials, or spikes. The computation performed by the neuron can be formulated as dimensional reduction, or feature detection, followed by a…

Biological Physics · Physics 2007-05-23 Blaise Aguera y Arcas , Adrienne L. Fairhall , William Bialek

A major goal in neuroscience is to understand how populations of neurons code for stimuli or actions. While the number of neurons that can be recorded simultaneously is increasing at a fast pace, in most cases these recordings cannot access…

Neurons and Cognition · Quantitative Biology 2019-04-10 Oleksandr Sorochynskyi , Stéphane Deny , Olivier Marre , Ulisse Ferrari

AI-based neural decoding reconstructs visual perception by leveraging generative models to map brain activity, measured through functional MRI (fMRI), into latent hierarchical representations. Traditionally, ridge linear models transform…

Image and Video Processing · Electrical Eng. & Systems 2025-09-04 Lorenzo Veronese , Andrea Moglia , Luca Mainardi , Pietro Cerveri

The abundant recurrent horizontal and feedback connections in the primate visual cortex are thought to play an important role in bringing global and semantic contextual information to early visual areas during perceptual inference, helping…

Neurons and Cognition · Quantitative Biology 2019-12-24 Siming Yan , Xuyang Fang , Bowen Xiao , Harold Rockwell , Yimeng Zhang , Tai Sing Lee

The computation performed by a neuron can be formulated as a combination of dimensional reduction in stimulus space and the nonlinearity inherent in a spiking output. White noise stimulus and reverse correlation (the spike-triggered average…

Biological Physics · Physics 2007-05-23 Blaise Aguera y Arcas , Adrienne Fairhall

We would like to know whether the statistics of neuronal responses vary across cortical areas. We examined stimulus-elicited spike count response distributions in V1 and IT cortices of awake monkeys. In both areas the distribution of spike…

Neurons and Cognition · Quantitative Biology 2007-05-23 Ethan D. Gershon , Matthew C. Wiener , Peter E. Latham , Barry J. Richmond

Understanding how the primate brain transforms complex visual scenes into coherent perceptual experiences remains a central challenge in neuroscience. Here, we present a comprehensive framework for interpreting monkey visual processing by…

Neurons and Cognition · Quantitative Biology 2025-10-10 Teng Fei , Srinivas Ravishankar , Hoko Nakada , Abhinav Uppal , Ian Jackson , Garrison W. Cottrell , Ryusuke Hayashi , Virginia R. de Sa
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