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In symbolic regression, the search for analytic models is typically driven purely by the prediction error observed on the training data samples. However, when the data samples do not sufficiently cover the input space, the prediction error…

Machine Learning · Computer Science 2020-04-28 J. Kubalík , E. Derner , R. Babuška

We introduce a general method for the study of memory in symbolic sequences based on higher-order Markov analysis. The Markov process that best represents a sequence is expressed as a mixture of matrices of minimal orders, enabling the…

Physics and Society · Physics 2021-08-04 Unai Alvarez-Rodriguez , Vito Latora

Motivation: Most existing methods for DNA sequence analysis rely on accurate sequences or genotypes. However, in applications of the next-generation sequencing (NGS), accurate genotypes may not be easily obtained (e.g. multi-sample…

Genomics · Quantitative Biology 2013-03-19 Heng Li

In applications such as social, energy, transportation, sensor, and neuronal networks, high-dimensional data naturally reside on the vertices of weighted graphs. The emerging field of signal processing on graphs merges algebraic and…

Discrete Mathematics · Computer Science 2015-06-12 David I Shuman , Sunil K. Narang , Pascal Frossard , Antonio Ortega , Pierre Vandergheynst

We introduce the concept of a \textbf{neuro-symbolic pair} -- neural and symbolic approaches that are linked through a common knowledge representation. Next, we present \textbf{taxonomic networks}, a type of discrimination network in which…

Artificial Intelligence · Computer Science 2025-06-02 Zekun Wang , Ethan L. Haarer , Nicki Barari , Christopher J. MacLellan

We present a framework for representing and modeling data on graphs. Based on this framework, we study three typical classes of graph signals: smooth graph signals, piecewise-constant graph signals, and piecewise-smooth graph signals. For…

Artificial Intelligence · Computer Science 2015-12-18 Siheng Chen , Rohan Varma , Aarti Singh , Jelena Kovačević

Reconstructing low-dimensional truth labels from high-dimensional experimental data is a central challenge in any scenario that relies on robust mappings across this so-called domain gap, from multi-particle final states in high-energy…

High Energy Physics - Phenomenology · Physics 2025-05-12 Wonyong Chung

Much of the on-going statistical analysis of DNA sequences is focused on the estimation of characteristics of coding and non-coding regions that would possibly allow discrimination of these regions. In the current approach, we concentrate…

Genomics · Quantitative Biology 2009-11-10 D. Kugiumtzis , A. Provata

This paper introduces a new similarity measure, the covering similarity, that we formally define for evaluating the similarity between a symbolic sequence and a set of symbolic sequences. A pair-wise similarity can also be directly derived…

Cryptography and Security · Computer Science 2018-10-30 Pierre-François Marteau

As irregularly structured data representations, graphs have received a large amount of attention in recent years and have been widely applied to various real-world scenarios such as social, traffic, and energy settings. Compared to…

Signal Processing · Electrical Eng. & Systems 2026-03-12 Yi Yan , Jiacheng Hou , Zhenjie Song , Ercan Engin Kuruoglu

Sequencing by synthesis is used in many next-generation DNA sequencing technologies. Some of the technologies, especially those exploring the principle of single-molecule sequencing, allow incomplete nucleotide incorporation in each cycle.…

Genomics · Quantitative Biology 2024-05-28 Yong Kong

The spectral symbols are useful tools to analyse the eigenvalue distribution when dealing with high dimensional linear systems. Given a matrix sequence with an asymptotic symbol, the last one depends only on the spectra of the individual…

Numerical Analysis · Mathematics 2017-10-03 Giovanni Barbarino

When neural networks are used to solve differential equations, they usually produce solutions in the form of black-box functions that are not directly mathematically interpretable. We introduce a method for generating symbolic expressions…

Machine Learning · Computer Science 2020-11-05 Maysum Panju , Ali Ghodsi

The human ability to flexibly reason using analogies with domain-general content depends on mechanisms for identifying relations between concepts, and for mapping concepts and their relations across analogs. Building on a recent model of…

Artificial Intelligence · Computer Science 2021-10-06 Hongjing Lu , Nicholas Ichien , Keith J. Holyoak

Neuro-symbolic artificial intelligence is a novel area of AI research which seeks to combine traditional rules-based AI approaches with modern deep learning techniques. Neuro-symbolic models have already demonstrated the capability to…

Artificial Intelligence · Computer Science 2021-09-14 Zachary Susskind , Bryce Arden , Lizy K. John , Patrick Stockton , Eugene B. John

Computational modeling of neurodynamical systems often deploys neural networks and symbolic dynamics. A particular way for combining these approaches within a framework called vector symbolic architectures leads to neural automata. An…

Neural and Evolutionary Computing · Computer Science 2023-02-07 Jone Uria-Albizuri , Giovanni Sirio Carmantini , Peter beim Graben , Serafim Rodrigues

How we choose to represent our data has a fundamental impact on our ability to subsequently extract information from them. Machine learning promises to automatically determine efficient representations from large unstructured datasets, such…

Biomolecules · Quantitative Biology 2022-05-31 Nicki Skafte Detlefsen , Søren Hauberg , Wouter Boomsma

Symbolic regression aims to discover human-interpretable equations that explain observational data. However, existing approaches rely heavily on discrete structure search (e.g., genetic programming), which often leads to high computational…

Machine Learning · Computer Science 2026-03-25 Fateme Memar , Tao Zhe , Dongjie Wang

The notion of equality (identity) is simple and ubiquitous, making it a key case study for broader questions about the representations supporting abstract relational reasoning. Previous work suggested that neural networks were not suitable…

Machine Learning · Computer Science 2022-05-03 Atticus Geiger , Alexandra Carstensen , Michael C. Frank , Christopher Potts

Neural networks have a reputation for being better at solving statistical or approximate problems than at performing calculations or working with symbolic data. In this paper, we show that they can be surprisingly good at more elaborated…

Symbolic Computation · Computer Science 2019-12-04 Guillaume Lample , François Charton