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This article introduces a highly parallel algorithm for molecular dynamics simulations with short-range forces on single node multi- and many-core systems. The algorithm is designed to achieve high parallel speedups for strongly…

Computational Physics · Physics 2013-11-20 R. Meyer

With the rapid development of big data technologies, how to dig out useful information from massive data becomes an essential problem. However, using machine learning algorithms to analyze large data may be time-consuming and inefficient on…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-14 Jiajun Shen

To gain a better performance, many researchers put more computing resource into an application. However, in the AI area, there is still a lack of a successful large-scale machine learning training application: The scalability and…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-15 Daning Cheng , Hanping Zhang , Fen Xia , Shigang Li , Yunquan Zhang

Empirical studies are fundamental in assessing the effectiveness of implementations of branch-and-bound algorithms. The complexity of such implementations makes empirical study difficult for a wide variety of reasons. Various attempts have…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-21 Stephen J. Maher , Ted K. Ralphs , Yuji Shinano

We present a novel parallelisation scheme that simplifies the adaptation of learning algorithms to growing amounts of data as well as growing needs for accurate and confident predictions in critical applications. In contrast to other…

Machine Learning · Computer Science 2018-10-09 Michael Kamp , Mario Boley , Olana Missura , Thomas Gärtner

The advent of high performance computing (HPC) and graphics processing units (GPU), present an enormous computation resource for Large data transactions (big data) that require parallel processing for robust and prompt data analysis. While…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-10-17 Kato Mivule , Benjamin Harvey , Crystal Cobb , Hoda El Sayed

In this paper we analyze, evaluate, and improve the performance of training generalized linear models on modern CPUs. We start with a state-of-the-art asynchronous parallel training algorithm, identify system-level performance bottlenecks,…

Machine Learning · Computer Science 2018-12-20 Nikolas Ioannou , Celestine Dünner , Kornilios Kourtis , Thomas Parnell

This paper proposes TASKPROF, a profiler that identifies parallelism bottlenecks in task parallel programs. It leverages the structure of a task parallel execution to perform fine-grained attribution of work to various parts of the program.…

Programming Languages · Computer Science 2017-07-04 Adarsh Yoga , Santosh Nagarakatte

Stochastic gradient descent (SGD) is a well known method for regression and classification tasks. However, it is an inherently sequential algorithm at each step, the processing of the current example depends on the parameters learned from…

Machine Learning · Computer Science 2017-05-24 Saeed Maleki , Madanlal Musuvathi , Todd Mytkowicz

Message Passing Interface (MPI) is the most commonly used paradigm in writing parallel programs since it can be employed not only within a single processing node but also across several connected ones. Data flow analysis concepts,…

Programming Languages · Computer Science 2013-11-06 Alaa Ismail Elnashar , Sultan Aljahdali , Mosaid Al Sadhan

Optimization of searching the best possible action depending on various states like state of environment, system goal etc. has been a major area of study in computer systems. In any search algorithm, searching best possible solution from…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-10 Shubhendra Pal Singhal , M. Sridevi

Background: We describe an informatics framework for researchers and clinical investigators to efficiently perform parameter sensitivity analysis and auto-tuning for algorithms that segment and classify image features in a large dataset of…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-13 George Teodoro , Tahsin Kurc , Luis F. R. Taveira , Alba C. M. A. Melo , Jun Kong , Joel Saltz

Sustainable development has emerged as a global priority, and industries are increasingly striving to align their operations with sustainable practices. Parallel machine scheduling (PMS) is a critical aspect of production planning that…

Neural and Evolutionary Computing · Computer Science 2023-11-23 Absalom E. Ezugwu

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

We describe our experiences in using SPIN to verify parts of the Multi Purpose Daemon (MPD) parallel process management system. MPD is a distributed collection of processes connected by Unix network sockets. MPD is dynamic: processes and…

Logic in Computer Science · Computer Science 2007-05-23 O. S. Matlin , E. Lusk , W. McCune

Many tasks in data mining and related fields can be formalized as matching between objects in two heterogeneous domains, including collaborative filtering, link prediction, image tagging, and web search. Machine learning techniques,…

Machine Learning · Computer Science 2014-10-24 Jingbo Shang , Tianqi Chen , Hang Li , Zhengdong Lu , Yong Yu

The goal of ranking and selection (R&S) procedures is to identify the best stochastic system from among a finite set of competing alternatives. Such procedures require constructing estimates of each system's performance, which can be…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-06-17 Eric C. Ni , Dragos F. Ciocan , Shane G. Henderson , Susan R. Hunter

We present an algorithm for cluster dynamics to efficiently simulate large systems on MIMD parallel computers with large numbers of processors. The method divides physical space into rectangular cells which are assigned to processors and…

High Energy Physics - Lattice · Physics 2009-10-22 Mike Flanigan , Pablo Tamayo

Software debugging is a very time-consuming process, which is even worse for multi-threaded programs, due to the non-deterministic behavior of thread-scheduling algorithms. However, the debugging time may be greatly reduced, if automatic…

Logic in Computer Science · Computer Science 2015-09-09 Erickson H. da S. Alves , Lucas C. Cordeiro , Eddie B. de Lima Filho

We describe an asynchronous parallel stochastic coordinate descent algorithm for minimizing smooth unconstrained or separably constrained functions. The method achieves a linear convergence rate on functions that satisfy an essential strong…

Optimization and Control · Mathematics 2014-11-12 Ji Liu , Stephen J. Wright , Christopher Ré , Victor Bittorf , Srikrishna Sridhar