Related papers: Volume exclusion and elasticity driven directional…
Diffusion through semipermeable structures arises in a wide range of processes in the physical and life sciences. Examples at the microscopic level range from artificial membranes for reverse osmosis to lipid bilayers regulating molecular…
The short-time dynamics of bacterial chromosomal loci is a mixture of subdiffusive and active motion, in the form of rapid relocations with near-ballistic dynamics. While previous work has shown that such rapid motions are ubiquitous, we…
We study exclusion processes on the integer lattice in which particles change their velocities due to stickiness. Specifically, whenever two or more particles occupy adjacent sites, they stick together for an extended period of time, and…
Intracellular transport processes driven by molecular motors can be described by stochastic lattice models of self-driven particles. Here we focus on bidirectional transport models excluding the exchange of particles on the same track. We…
Active adaptive matter has attracted considerable interest due to its rich, largely unexplained dynamics and its relevance to a wide range of synthetic and biological materials. An important subclass of such systems consists of active…
Shape changes resulting from segmental flexibility are ubiquitous in molecular and biological systems, and are expected to affect both the diffusive motion and (biological) function of dispersed objects. The recent development of colloidal…
The diffusive behavior of small entities is strongly influenced by the flow of the surrounding medium, which is ubiquitous in natural and artificial environments. In this study, we investigate the transport characteristics of the inertial…
We introduce a model which incorporate the subdiffusive dynamics and the ratchet effect. Using a subordination ideology, we show that the resulting directed transport is sublinear, $<x(t)> \simeq Jt^{\beta}$, $\beta < 1$. The proposed model…
Colloids coupled to a bath of swimming cells generically display enhanced diffusion. This transport dynamics stems from a subtle interplay between the active and passive particles that still resists our understanding despite decades of…
Driven diffusive systems constitute paradigmatic models of nonequilibrium physics. Among them, a driven lattice gas known as the asymmetric simple exclusion process (ASEP) is the most prominent example for which many intriguing exact…
We study the role of anisotropic steric interactions in a system of hard Brownian needles. Despite having no volume, non-overlapping needles exclude a volume in configuration space that influences the macroscopic evolution of the system.…
We present the results of a numerical investigation of charged-particle transport across a synthesized magnetic configuration composed of a constant homogeneous background field and a multiscale perturbation component simulating an effect…
We apply macroscopic fluctuation theory to study the diffusion of a tracer in a one-dimensional interacting particle system with excluded mutual passage, known as single-file diffusion. In the case of Brownian point particles with hard-core…
Transport in a one-dimensional symmetric device can be activated by the combination of thermal noise and a bi-harmonic drive. For the study case of an overdamped Brownian particle diffusing on a periodic one-dimensional substrate, we…
This paper addresses uphill transport (defined as a regime in which particle flow is opposite to the prescriptions of Fick's diffusion) in drift-diffusion particle transport constrained by volume exclusion. Firstly, we show that the…
Many theoretical works have attempted to coarse grain gene expression at the level of transcription and translation via frameworks based on exclusion processes. Usually in these models the three-dimensional conformation of the substrates…
Transport and diffusion of heat in one dimensional (1D) nonlinear systems which {\it conserve momentum} is typically thought to proceed anomalously. Notable exceptions, however, exist of which the rotator model is a prominent case.…
After summarizing basic features of self-organization such as entropy export, feedbacks and nonlinear dynamics, we discuss several examples in biology. The main part of the paper is devoted to a model of active Brownian motion that allows a…
We investigate emergence of spontaneous filtering of Brownian motion in higher dimensional space by many--body structures of symmetry broken dimer. Interacting dimer form structures which eventually restrict rotational degrees of freedom of…
We study diffusion properties of an inertial Brownian motor moving on a ratchet substrate, i.e. a periodic structure with broken reflection symmetry. The motor is driven by an unbiased time-periodic symmetric force which takes the system…