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A complex interplay between species governs the evolution of spatial patterns in ecology. An open problem in the biological sciences is characterising spatio-temporal data and understanding how changes at the local scale affect global…

Quantitative Methods · Quantitative Biology 2023-08-15 Robert A. McDonald , Rosanna Neuhausler , Martin Robinson , Laurel G. Larsen , Heather A. Harrington , Maria Bruna

We have investigated the organization and dynamics of the large turbulent structures that develop in the logarithmic and outer layers of high-Reynolds-number wall flows. These structures have sizes comparable to the flow thickness and…

Fluid Dynamics · Physics 2013-09-11 Juan C. del Alamo

Lagrangian data assimilation is a complex problem in oceanic and atmospheric modeling. Tracking drifters in large-scale geophysical flows can involve uncertainty in drifter location, complex inertial effects, and other factors which make…

Fluid Dynamics · Physics 2019-01-30 Kristy L. Schlueter-Kuck , John O. Dabiri

Coherent filaments at the ocean surface often appear to be transient watermass boundaries, where currents converge, surfactants accumulate, and frontal structure at depth can possibly delineate enhanced biological activity in the upper…

Applications · Statistics 2023-02-09 Richard E. Danielson , Hui Shen , Jing Tao , William Perrie

We present a multi-scale modeling and simulation framework for low-Reynolds number hydrodynamics of shape-changing immersed objects, e.g., biological microswimmers and active surfaces. The key idea is to consider principal shape changes as…

Soft Condensed Matter · Physics 2020-12-18 Anton Solovev , Benjamin M. Friedrich

Flows over remarkably long distances are crucial to the functioning of many organisms, across all kingdoms of life. Coordinated flows are fundamental to power deformations, required for migration or development, or to spread resources and…

Biological Physics · Physics 2018-10-19 Jean-Daniel Julien , Karen Alim

How predictable is the next move of an animal? Specifically, which factors govern the short- and long-term motion patterns and the overall dynamics of landbound, plant-eating animals and ruminants in particular? To answer this question, we…

Statistical Mechanics · Physics 2023-05-12 P. G. Meyer , A. G. Cherstvy , H. Seckler , R. Hering , N. Blaum , F. Jeltsch , R. Metzler

Sea urchin feeding fronts are a striking example of spatial pattern formation in an ecological system. If it is assumed that urchins are asocial, and that they move randomly, then the formation of these dense fronts is an apparent paradox.…

Populations and Evolution · Quantitative Biology 2007-05-23 Edward R Abraham

Precisely how ecological factors influence animal social structure is far from clear. We explore this question using an agent-based model inspired by the fission-fusion society of Spider monkeys (Ateles spp). Our model introduces a…

Populations and Evolution · Quantitative Biology 2007-05-23 Gabriel Ramos-Fernández , Denis Boyer , Vian P. Gómez

A theoretical framework is developed for understanding the transient growth and propagation characteristics of thermodynamically coupled, meridional mode-like structures in the tropics. The model consists of a Gill-Matsuno type steady…

Atmospheric and Oceanic Physics · Physics 2017-06-06 Cristian Martinez-Villalobos , Daniel J. Vimont

Mixing in the Bay of Bengal, driven by altimetry derived daily geostrophic surface currents, is studied on subseasonal timescales. Hovm{\"o}ller and wavenumber-frequency diagrams with power spectra confirm the multiscale nature of the flow.…

Atmospheric and Oceanic Physics · Physics 2021-01-27 Nihar Paul , Jai Sukhatme

We review and discuss some different techniques for describing local dispersion properties in fluids. A recent Lagrangian diagnostics, based on the Finite Scale Lyapunov Exponent (FSLE), is presented and compared to the Finite Time Lyapunov…

Chaotic Dynamics · Physics 2009-11-07 G. Boffetta , G. Lacorata , G. Redaelli , A. Vulpiani

Fish schools and bird flocks exhibit complex collective dynamics whose self-organization principles are largely unknown. The influence of hydrodynamics on such collectives has been relatively unexplored theoretically, in part due to the…

Soft Condensed Matter · Physics 2019-11-06 Anand U. Oza , Leif Ristroph , Michael J. Shelley

We performed large-eddy simulations of the flow over a typical two-dimensional dune geometry at laboratory scale (the Reynolds number based on the average channel height and mean velocity is 18,900) using the Lagrangian dynamic…

Fluid Dynamics · Physics 2011-10-07 Mohammad Omidyeganeh , Ugo Piomelli

The hydrodynamics of a flagellated microorganism is investigated when swimming close to a planar free-slip surface by means of numerical solu- tions of the Stokes equations obtained via a Boundary Element Method. Depending on the initial…

Fluid Dynamics · Physics 2017-03-31 Daniela Pimponi , Mauro Chinappi , Paolo Gualtieri , Carlo Massimo Casciola

Predators and their foraging strategies often determine ecosystem structure and function. Yet, the role of protozoan predators in microbial soil ecosystems remains elusive despite the importance of these ecosystems to global biogeochemical…

Populations and Evolution · Quantitative Biology 2023-01-11 Fernando W. Rossine , Gabriel Vercelli , Corina E. Tarnita , Thomas Gregor

Macroscopic active matter systems, such as bristle bots, provide a compelling platform for investigating nonequilibrium dynamics at highly visible scales. To fully leverage their accessibility, accurate mathematical models are needed to…

Soft Condensed Matter · Physics 2026-04-08 Thomas Kiechl , Amy Altshuler , Anton Lüders , Yael Roichman , Thomas Franosch

The dispersion of a passive scalar by wall turbulence, in the limit of infinite Peclet number, is analyzed using frozen velocity fields from the DNS by our group. The Lagrangian trajectories of fluid particles in those fields are integrated…

Fluid Dynamics · Physics 2013-09-11 Juan C. del Alamo , Javier Jimenez

Animals and insects showcase remarkably robust and adept navigational abilities, up to literally circumnavigating the globe. Primary progress in robotics inspired by these natural systems has occurred in two areas: highly theoretical…

Robotics · Computer Science 2023-08-02 Therese Joseph , Tobias Fischer , Michael Milford

We present the hydrodynamic theory of coherent collective motion ("flocking") at a solid-liquid interface, and many of its predictions for experiment. We find that such systems are stable, and have long-range orientational order, over a…

Soft Condensed Matter · Physics 2022-01-05 Niladri Sarkar , Abhik Basu , John Toner