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A grand canonical Monte Carlo (MC) algorithm is presented for studying the lattice gas model (LGM) of multiple protein sequence alignment, which coherently combines long-range interactions and variable-length insertions. MC simulations are…
We study SU(3) gauge theory on small lattices in the minimal (qutrit) electric field truncation retaining only the ${\bf 1}, {\bf 3}, {\bf \overline{3}}$ representations for the link variables. Explicit expressions are given for the…
We investigate methods for variance reduction and the elimination of systematic error in a Fourier accelerated Langevin scheme for general spin models. We present results for the $SU(3)\times SU(3)/SU(3)$ model in two-dimensions that are…
Approximations of chiral SU(3) amplitudes at NNLO are proposed to facilitate the extrapolation of lattice data to the physical meson masses. Inclusion of NNLO terms is essential for investigating convergence properties of chiral SU(3) and…
The Wilson action for Euclidean lattice gauge theory defines a positive-definite transfer matrix that corresponds to a unitary lattice gauge theory time-evolution operator if analytically continued to real time. Hoshina, Fujii, and Kikukawa…
The 4-d SU(2) lattice gauge theory is simulated in the minimal Coulomb gauge which aims to maximize the traces of all links in three directions. Fourth-direction links are interpreted as spins in a Heisenberg-like model with varying…
Massless overlap fermions in the real representation of two dimensional $SU(N_c)$ gauge theories exhibit a mod($2$) index due to the rigidity of its spectrum when viewed as a function of the background gauge field - lattice gauge fields on…
At fine lattice spacings, lattice simulations are plagued by slow (topological) modes that give rise to large autocorrelation times. These, in turn, lead to statistical and systematic errors that are difficult to estimate. We study the…
In the quenched approximation we use the abelian and monopole fields from abelian projection in SU(2) lattice gauge theory to numerically compute the value of the chiral condensate. The condensate calculated using abelian projection is…
We study the thermal phase diagram of pure SU(3) lattice gauge theory with fundamental and adjoint couplings. We improve previous estimates of the position of the bulk transition line and determine the thermal deconfinement transition lines…
Results of our autocorrelation measurement performed on Fujitsu AP1000 are reported. We analyze (i) typical autocorrelation time, (ii) optimal mixing ratio between overrelaxation and pseudo-heatbath and (iii) critical behavior of…
We present a brief overview of our recent lattice studies of SU(3) gauge theory with N_f = 8 and 12 fundamental fermions, including some new and yet-unpublished results. To explore relatively unfamiliar systems beyond lattice QCD, we carry…
Monte Carlo simulations are carried out on the (3+1)-dimensional Z(2) anisotropic lattice model, and a new method to simulate extremely anisotropic lattice systems with discrete symmetries is proposed. Dependence of the temporal and spatial…
We explore aspects of the phase structure of SU(2) and SU(3) lattice gauge theories at strong coupling with many flavours $N_f$ of Wilson fermions in the fundamental representation. The pseudoscalar meson mass as a function of hopping…
We analyze the properties of four-quark condensates and scalar susceptibilities in the meson gas, within finite temperature Chiral Perturbation Theory (ChPT). The breaking of the factorization hypothesis does not allow for a finite…
We investigate SU(2) lattice gauge theory in four dimensions in the maximally abelian projection. Studying the effects on different lattice sizes we show that the deconfinement transition of the fields and the percolation transition of the…
An extension of the synchronous parallel kinetic Monte Carlo (pkMC) algorithm developed by Martinez {\it et al} [{\it J.\ Comp.\ Phys.} {\bf 227} (2008) 3804] to discrete lattices is presented. The method solves the master equation…
The pressure and the energy density of the $SU(3)$ gauge theory are calculated on lattices with temporal extent $N_\tau = 4$, 6 and 8 and spatial extent $N_\sigma =16$ and 32. The results are then extrapolated to the continuum limit. In the…
We test a possible digitization of $\mathrm{SU}(2)$ lattice gauge theories based on partitionings of the sphere $S_3$. In our construction the link operators are unitary and diagonal, with eigenvalues determined by the vertices of the…
In this paper, we present an algorithm to computea fiberwise Lagrangian torus in quasi-periodic (QP) Hamiltonian systems, whose convergence is proved in the [CHP25]. We exhibit the algorithm with two models. The first is a Tokamak model…