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We present an approach for flux analysis in process algebra models of biological systems. We perceive flux as the flow of resources in stochastic simulations. We resort to an established correspondence between event structures, a broadly…

Computational Engineering, Finance, and Science · Computer Science 2010-02-23 Ozan Kahramanoğullari

Petri Nets (PN) are widely used for modeling concurrent and distributed systems, but face challenges in modeling adaptive systems. To address this, we have formalized "rewritable" PT nets (RwPT) using Maude, a declarative language with…

Performance · Computer Science 2025-02-14 Lorenzo Capra

In this thesis a comprehensive verification framework is proposed to contend with some important issues in composability verification and a verification process is suggested to verify composability of different kinds of systems models, such…

Software Engineering · Computer Science 2023-01-10 Imran Mahmood

To model check concurrent systems, it is convenient to distinguish between the data flow and the control. Correctness is specified on the level of data flow whereas the system is configured on the level of control. Petri nets with transits…

Logic in Computer Science · Computer Science 2020-07-15 Bernd Finkbeiner , Manuel Gieseking , Jesko Hecking-Harbusch , Ernst-Rüdiger Olderog

To prove liveness properties of concurrent systems, it is often necessary to postulate progress, fairness and justness properties. This paper investigates how the necessary progress, fairness and justness assumptions can be added to or…

Logic in Computer Science · Computer Science 2015-01-15 Rob van Glabbeek , Peter Höfner

In many networks, including networks of protein-protein interactions, interdisciplinary collaboration networks, and semantic networks, connections are established between nodes with complementary rather than similar properties. While…

Physics and Society · Physics 2023-03-08 Gabriel Budel , Maksim Kitsak

This paper introduces negotiations, a model of concurrency close to Petri nets, with multi-party negotiations as concurrency primitive. We study two fundamental analysis problems. The soundness problem consists in deciding if it is always…

Logic in Computer Science · Computer Science 2016-12-26 Joerg Desel , Javier Esparza , Philipp Hoffmann

As a consequence to the hype of Grid computing, such systems have seldom been designed using formal techniques. The complexity and rapidly growing demand around Grid technologies has favour the use of classical development techniques,…

Software Engineering · Computer Science 2007-05-23 David Manset , Richard McClatchey , Flavio Oquendo , Herve Verjus

Economy, and consequently trade, is a fundamental part of human social organization which, until now, has not been studied within the network modelling framework. Networks are mathematical tools used in the modelling of a wide variety of…

Disordered Systems and Neural Networks · Physics 2009-11-10 M. Angeles Serrano , Marian Boguna

The evolution of self-adaptive systems poses the problems of their coherence and the resume of the systems' functioning taking into account the accomplished work. While they are the base of the self-adaptive systems, these two aspects are…

Software Engineering · Computer Science 2014-06-16 Ammar Lahlouhi

In recent times, the functioning of various aspects of modern society---ranging from the various infrastructural utilities such as electrical power, water to socio-economical aspects such as telecommunications, business, commerce,…

Networking and Internet Architecture · Computer Science 2016-12-30 Waqar Ahmed , Osman Hasan , Usman Pervez , Junaid Qadir

Networks are widely used in the biological, physical, and social sciences as a concise mathematical representation of the topology of systems of interacting components. Understanding the structure of these networks is one of the outstanding…

Data Analysis, Statistics and Probability · Physics 2007-06-21 M. E. J. Newman , E. A. Leicht

The paper is devoted to a mathematical model of concurrency the special case of which is asynchronous system. Distributed asynchronous automata are introduced here. It is proved that the Petri nets and transition systems with independence…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-15 Ahmet A. Husainov , Ekaterina S. Kudryashova

Recently, extensive efforts have been made on the application of expert system technique to solving the process planning task in the machining domain. This paper introduces a new formal method to design CAPP expert systems. The formal…

Artificial Intelligence · Computer Science 2007-05-23 V. V. Kryssanov , A. S. Kleshchev , Y. Fukuda , K. Konishi

We present a mathematical analysis of the speciation model for food-web structure, which had in previous work been shown to yield a good description of empirical data of food-web topology. The degree distributions of the network are…

Populations and Evolution · Quantitative Biology 2007-05-23 A. G. Rossberg , H. Matsuda , T. Amemiya , K. Itoh

We formally characterize a set of causality-based properties of metabolic networks. This set of properties aims at making precise several notions on the production of metabolites, which are familiar in the biologists' terminology. From a…

Computational Engineering, Finance, and Science · Computer Science 2010-02-23 Chiara Bodei , Andrea Bracciali , Davide Chiarugi , Roberta Gori

Networks have attracted a burst of attention in the last decade, with applications to natural, social, and technological systems. While networks provide a powerful abstraction for investigating relationships and interactions, the…

Physics and Society · Physics 2010-04-09 Michael J. Barber , Manfred Paier , Thomas Scherngell

Detectability describes the property of a system to uniquely determine, after a finite number of observations, the current and subsequent states. In this paper, to reduce the complexity of checking the detectability properties in the…

Systems and Control · Electrical Eng. & Systems 2019-08-27 Hao Lan , Yin Tong , Jin Guo , Carla Seatzu

We present a unifying framework for type systems for process calculi. The core of the system provides an accurate correspondence between essentially functional processes and linear logic proofs; fragments of this system correspond to…

Logic in Computer Science · Computer Science 2015-05-29 Emmanuel Beffara

Choreography-based approaches to service composition typically assume that, after a set of services has been found which correctly play the roles prescribed by the choreography, each service respects his role. Honest services are not…

Logic in Computer Science · Computer Science 2020-04-17 Massimo Bartoletti , Tiziana Cimoli , G. Michele Pinna