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Principal component analysis (PCA) represents a standard approach to identify collective variables $\{x_i\}\!=\!\boldsymbol{x}$, which can be used to construct the free energy landscape $\Delta G(\boldsymbol{x})$ of a molecular system.…

Biomolecules · Quantitative Biology 2019-05-30 Matthias Post , Steffen Wolf , Gerhard Stock

We analyse a sample of 26 active galactic nuclei with deep XMM-Newton observations, using principal component analysis (PCA) to find model independent spectra of the different variable components. In total, we identify at least 12…

High Energy Astrophysical Phenomena · Physics 2015-06-23 M. L. Parker , A. C. Fabian , G. Matt , K. I. I. Koljonen , E. Kara , W. Alston , D. J. Walton , A. Marinucci , L. Brenneman , G. Risaliti

One of the main tasks for present and future dark energy surveys is to determine whether the dark energy is dynamical or not. To illustrate this from data, it is commonly used to parameterize the dark energy equation of state w as several…

Cosmology and Nongalactic Astrophysics · Physics 2015-03-17 Seokcheon Lee

Principal component analysis (PCA) is a popular dimension reduction technique often used to visualize high-dimensional data structures. In genomics, this can involve millions of variables, but only tens to hundreds of observations.…

Statistics Theory · Mathematics 2020-06-11 Kristoffer Hellton , Magne Thoresen

Functional principal component analysis (FPCA) is a widely used technique in functional data analysis for identifying the primary sources of variation in a sample of random curves. The eigenfunctions obtained from standard FPCA typically…

Methodology · Statistics 2025-06-04 Maria Laura Battagliola , Jan O. Bauer

Principal Component Analysis (PCA) is a classical method for reducing the dimensionality of data by projecting them onto a subspace that captures most of their variation. Effective use of PCA in modern applications requires understanding…

Statistics Theory · Mathematics 2019-06-14 David Hong , Laura Balzano , Jeffrey A. Fessler

Modal analysis techniques are used to identify patterns and develop reduced-order models in a variety of fluid applications. However, experimentally acquired flow fields may be corrupted with incorrect and missing entries, which may degrade…

In the near future, space-borne gravitational wave (GW) detector LISA can open the window of low-frequency band of GW and provide new tools to test gravity theories. In this work, we consider multi-parameter tests of GW generation and…

General Relativity and Quantum Cosmology · Physics 2024-03-05 Rui Niu , Zhi-Chu Ma , Ji-Ming Chen , Chang Feng , Wen Zhao

We present the results of a new search for variable stars in the Local Group dwarf galaxy Leo A, based on deep photometry from the Advanced Camera for Surveys onboard the Hubble Space Telescope. We detected 166 bona fide variables in our…

In this paper we develop a new approach to sparse principal component analysis (sparse PCA). We propose two single-unit and two block optimization formulations of the sparse PCA problem, aimed at extracting a single sparse dominant…

Optimization and Control · Mathematics 2008-12-01 Michel Journée , Yurii Nesterov , Peter Richtárik , Rodolphe Sepulchre

Previous versions of sparse principal component analysis (PCA) have presumed that the eigen-basis (a $p \times k$ matrix) is approximately sparse. We propose a method that presumes the $p \times k$ matrix becomes approximately sparse after…

Machine Learning · Statistics 2023-08-07 Fan Chen , Karl Rohe

Principal Component Analysis (PCA) is a widely used technique in exploratory data analysis, visualization, and data preprocessing, leveraging the concept of variance to identify key dimensions in datasets. In this study, we focus on the…

Applications · Statistics 2024-07-03 Reza Dastranj , Martin Kolar

The spectrum of a galaxy is a complicated convolution of many properties of the galaxy, such as the star formation history (SFH), initial mass function, and metallicity. Inferring galaxy properties from the observed spectrum via spectral…

Astrophysics of Galaxies · Physics 2025-08-18 Yanzhe Zhang , H. J. Mo , Katherine E. Whitaker , Shuang Zhou

A realistic 3D anthropomorphic software model of microcalcifications may serve as a useful tool to assess the performance of breast imaging applications through simulations. We present a method allowing to simulate visually realistic…

Principal Component Analysis (PCA) has been widely used for dimensionality reduction and feature extraction. Robust PCA (RPCA), under different robust distance metrics, such as l1-norm and l2, p-norm, can deal with noise or outliers to some…

Machine Learning · Computer Science 2021-06-29 Zhao Kang , Hongfei Liu , Jiangxin Li , Xiaofeng Zhu , Ling Tian

Principal Component Analysis (PCA) is a method for estimating a subspace given noisy samples. It is useful in a variety of problems ranging from dimensionality reduction to anomaly detection and the visualization of high dimensional data.…

Statistics Theory · Mathematics 2019-06-14 David Hong , Laura Balzano , Jeffrey A. Fessler

The mid-infrared spectra of ultraluminous infrared galaxies (ULIRGs) contain a variety of spectral features that can be used as diagnostics to characterise the spectra. However, such diagnostics are biased by our prior prejudices on the…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-05 Peter D Hurley , Seb Oliver , Duncan Farrah , Lingyu Wang , Andreas Efstathiou

Principal component analysis (PCA) is widely used for feature extraction and dimensionality reduction, with documented merits in diverse tasks involving high-dimensional data. Standard PCA copes with one dataset at a time, but it is…

Machine Learning · Computer Science 2019-01-30 Jia Chen , Gang Wang , Georgios B. Giannakis

We consider the problem of decomposing a large covariance matrix into the sum of a low-rank matrix and a diagonally dominant matrix, and we call this problem the "Diagonally-Dominant Principal Component Analysis (DD-PCA)". DD-PCA is an…

Methodology · Statistics 2019-06-04 Zheng Tracy Ke , Lingzhou Xue , Fan Yang

Principal component analysis is a statistical method, which lowers the number of important variables in a data set. The use of this method for the bursts' spectra and afterglows is discussed in this paper. The analysis indicates that three…

Astrophysics · Physics 2015-05-13 Z. Bagoly , I. Horvath , L. G. Balazs , L. Borgonovo , S. Larsson , A. Meszaros , F. Ryde
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