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Cell fate decisions emerge as a consequence of a complex set of gene regulatory networks. Models of these networks are known to have more parameters than data can determine. Recent work, inspired by Waddington's metaphor of a landscape, has…

Quantitative Methods · Quantitative Biology 2023-05-08 Archishman Raju , Eric D. Siggia

The structure and evolution of Terrestrial Transportation Infrastructures (TTIs) are shaped by both socio-political and geographical factors, hence encoding crucial information about how resources and power are distributed through a…

Physics and Society · Physics 2021-09-29 Luce Prignano , Lluc Font-Pomarol , Ignacio Morer , Sergi Lozano

Spatial ecological networks are widely used to model interactions between georeferenced biological entities (e.g., populations or communities). The analysis of such data often leads to a two-step approach where groups containing similar…

Applications · Statistics 2014-02-24 Vincent Miele , Franck Picard , Stéphane Dray

Large real-life complex networks are often modeled by various random graph constructions and hundreds of further references therein. In many cases it is not at all clear how the modeling strength of differently generated random graph model…

Data Structures and Algorithms · Computer Science 2020-09-01 András Faragó , Rupei Xu

Understanding how packets are routed in Internet is significantly important to Internet measurement and modeling. The conventional solution for route simulation is based on the assumption of unweighted shortest path. However, it has been…

Networking and Internet Architecture · Computer Science 2014-09-30 Mingming Chen , Jichang Zhao , Xiao Liang , Ke Xu

Most cities in the US and in the world were organized around car traffic. In particular, large structures such as urban freeways or ring roads were built for reducing car traffic congestion. With the evolution of public transportation,…

Physics and Society · Physics 2023-03-29 Erwan Taillanter , Marc Barthelemy

A continuously evolving geography requires a good understanding in networks. As such, this paper accounts for theories and applications of complex networks and their role both in geography in general, as well as in determining various…

Social and Information Networks · Computer Science 2019-06-24 Alexandra Barina , Gabriel Barina , Mihai Udrescu

The city is a complex system that evolves through its inherent social and economic interactions. Mediating the movements of people and resources, urban street networks offer a spatial footprint of these activities; consequently their…

Physics and Society · Physics 2018-04-19 Minjin Lee , Hugo Barbosa , Hyejin Youn , Petter Holme , Gourab Ghoshal

Our current world is revolutionned by the networks which are interconnecting any machine to any other one. Nowadays equipments are plugged to the network by the way of many different network adapters (Ethernet, wifi, GSM), and network…

Networking and Internet Architecture · Computer Science 2011-12-21 Bachir Chihani , Denis Collange

Dependency networks (Heckerman et al., 2000) provide a flexible framework for modeling complex systems with many variables by combining independently learned local conditional distributions through pseudo-Gibbs sampling. Despite their…

Machine Learning · Computer Science 2026-04-02 Kazuya Takabatake , Shotaro Akaho

Inference and prediction of routes have become of interest over the past decade owing to a dramatic increase in package delivery and ride-sharing services. Given the underlying combinatorial structure and the incorporation of probabilities,…

Logic in Computer Science · Computer Science 2023-06-21 Suwei Yang , Victor C. Liang , Kuldeep S. Meel

Recent availability of geo-localized data capturing individual human activity together with the statistical data on international migration opened up unprecedented opportunities for a study on global mobility. In this paper we consider it…

Social and Information Networks · Computer Science 2016-01-22 Alexander Belyi , Iva Bojic , Stanislav Sobolevsky , Izabela Sitko , Bartosz Hawelka , Lada Rudikova , Alexander Kurbatski , Carlo Ratti

Shape matching has been a long-studied problem for the computer graphics and vision community. The objective is to predict a dense correspondence between meshes that have a certain degree of deformation. Existing methods either consider the…

Computer Vision and Pattern Recognition · Computer Science 2022-02-04 Mahdi Saleh , Shun-Cheng Wu , Luca Cosmo , Nassir Navab , Benjamin Busam , Federico Tombari

Many real-world complex systems are best modeled by multiplex networks of interacting network layers. The multiplex network study is one of the newest and hottest themes in the statistical physics of complex networks. Pioneering studies…

Physics and Society · Physics 2016-10-31 Kyu-Min Lee , Byungjoon Min , Kwang-Il Goh

We review mathematically tractable models for connected networks on random points in the plane, emphasizing the class of proximity graphs which deserves to be better known to applied probabilists and statisticians. We introduce and motivate…

Probability · Mathematics 2011-01-06 David J. Aldous , Julian Shun

The autonomous automotive industry is one of the largest and most conventional projects worldwide, with many technology companies effectively designing and orienting their products towards automobile safety and accuracy. These products are…

Computer Vision and Pattern Recognition · Computer Science 2021-02-23 Abdul Azeem Sikander , Hamza Ali

Mechanistic network models specify the mechanisms by which networks grow and change, allowing researchers to investigate complex systems using both simulation and analytical techniques. Unfortunately, it is difficult to write likelihoods…

Methodology · Statistics 2023-07-19 Jonathan Larson , Jukka-Pekka Onnela

There is quickly growing literature on machine-learned models that predict human driving trajectories in road traffic. These models focus their learning on low-dimensional error metrics, for example average distance between model-generated…

We consider the size and structure of the automorphism groups of a variety of empirical `real-world' networks and find that, in contrast to classical random graph models, many real-world networks are richly symmetric. We relate automorphism…

Physics and Society · Physics 2020-08-05 Ben D. MacArthur , Rubén J. Sánchez-García , James W. Anderson

From our experiences in the past, we have seen that the growth of cities is very much dependent on the transportation networks. In mega cities, transportation networks determine to a significant extent as to where the people will move and…

Artificial Intelligence · Computer Science 2018-02-08 Saptarshi Pal , Soumya K Ghosh
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