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DNA computing is an unconventional approach to computing that harnesses the parallelism and information storage capabilities of DNA molecules. It has emerged as a promising field with potential applications in solving a variety of…

Emerging Technologies · Computer Science 2024-06-04 Muhammad Asad Tariq , Rafay Junaid , Muhammad Mehdy Hasnain , Danyal Farhat

Genome sequencing technology has advanced at a rapid pace and it is now possible to generate highly-detailed genotypes inexpensively. The collection and analysis of such data has the potential to support various applications, including…

Cryptography and Security · Computer Science 2015-06-18 Muhammad Naveed , Erman Ayday , Ellen W. Clayton , Jacques Fellay , Carl A. Gunter , Jean-Pierre Hubaux , Bradley A. Malin , XiaoFeng Wang

DNA sequencing has faced a huge demand since it was first introduced as a service to the public. This service is often offloaded to the sequencing companies who will have access to full knowledge of individuals' sequences, a major violation…

Information Theory · Computer Science 2019-04-04 Ali Gholami , Mohammad Ali Maddah-Ali , Seyed Abolfazl Motahari

Since the birth of computer and networks, fuelled by pervasive computing and ubiquitous connectivity, the amount of data stored and transmitted has exponentially grown through the years. Due to this demand, new solutions for storing data…

The domain name system (DNS) that maps alphabetic names to numeric Internet Protocol (IP) addresses plays a foundational role for Internet communications. By default, DNS queries and responses are exchanged in unencrypted plaintext, and…

Cryptography and Security · Computer Science 2024-07-08 Minzhao Lyu , Hassan Habibi Gharakheili , Vijay Sivaraman

DNA based storage systems received attention by many researchers. This includes archival and re-writable random access DNA based storage systems. In this work, we have developed an efficient technique to encode the data into DNA sequence by…

Information Theory · Computer Science 2016-04-25 Dixita Limbachiya , Vijay Dhameliya , Madhav Khakhar , Manish K Gupta

DNA has been considered a promising medium for storing digital information. As an essential step in the DNA-based data storage workflow, coding algorithms are responsible to implement functions including bit-to-base transcoding, error…

Emerging Technologies · Computer Science 2023-03-31 Haoling Zhang , Zhaojun Lan , Wenwei Zhang , Xun Xu , Zhi Ping , Yiwei Zhang , Yue Shen

DNA fingerprinting and matching for identifying suspects has been a common practice in criminal investigation. Such proceedings involve multiple parties such as investigating agencies, suspects and forensic labs. A major challenge in such…

Cryptography and Security · Computer Science 2024-09-24 Sankha Das

Due to its longevity and enormous information density, DNA is an attractive medium for archival storage. In this work, we study the fundamental limits and trade-offs of DNA-based storage systems by introducing a new channel model, which we…

Information Theory · Computer Science 2020-01-20 Ilan Shomorony , Reinhard Heckel

In the current era, DeoxyriboNucleic Acid (DNA) based data storage emerges as an intriguing approach, garnering substantial academic interest and investigation. This paper introduces a novel deep joint source-channel coding (DJSCC) scheme…

Emerging Technologies · Computer Science 2023-11-03 Wenfeng Wu , Luping Xiang , Qiang Liu , Kun Yang

Today, the protection of information, ensuring of the safety and the recall in lossless in case of need is highly significant and it is seen as a major threat in the field. Information security is possible by hiding the available data, by…

Cryptography and Security · Computer Science 2019-02-13 Nurettin Topaloglu , M. Hanefi Calp , Burak Turk

A number of methods have been proposed over the last decade for encoding information using deoxyribonucleic acid (DNA), giving rise to the emerging area of DNA data embedding. Since a DNA sequence is conceptually equivalent to a sequence of…

Information Theory · Computer Science 2014-10-09 Félix Balado

DNA sequence encoding is fundamental to gene function prediction, protein synthesis, and diverse downstream biological tasks. Despite the substantial progress achieved by large-scale DNA sequence pretraining, existing studies have…

Machine Learning · Computer Science 2026-04-21 Zhijiang Tang , Jiaxin Qi , Yan Cui , Jinli Ou , Yuhua Zheng , Jianqiang Huang

Theoretical computer science has found fertile ground in many areas of mathematics. The approach has been to consider classical problems through the prism of computational complexity, where the number of basic computational steps taken to…

Cryptography and Security · Computer Science 2007-05-23 Shafi Goldwasser

In today's digital age, the internet is essential for communication and the sharing of information, creating a critical need for sophisticated data security measures to prevent unauthorized access and exploitation. Cryptography encrypts…

Cryptography and Security · Computer Science 2024-04-12 Anamitra Maiti , Subham Laha , Rishav Upadhaya , Soumyajit Biswas , Vikas Chaudhary , Biplab Kar , Nikhil Kumar , Jaydip Sen

The DNA storage channel is considered, in which a codeword is comprised of $M$ unordered DNA molecules. At reading time, $N$ molecules are sampled with replacement, and then each molecule is sequenced. A coded-index concatenated-coding…

Information Theory · Computer Science 2022-05-23 Nir Weinberger

Recent advances in DNA sequencing technologies have put ubiquitous availability of fully sequenced human genomes within reach. It is no longer hard to imagine the day when everyone will have the means to obtain and store one's own DNA…

Cryptography and Security · Computer Science 2015-03-19 Pierre Baldi , Roberta Baronio , Emiliano De Cristofaro , Paolo Gasti , Gene Tsudik

Fairly recently, a new encryption scheme for audio data encryption has been proposed by Naskar, P.K., et al. The cryptosystem is based on substitution-permutation encryption structure using DNA encoding at the substitution stage, in which…

Cryptography and Security · Computer Science 2021-06-21 Imad El Hanouti , Hakim El Fadili

The signcryption is a relatively new cryptographic technique that is supposed to fulfill the functionalities of encryption and digital signature in a single logical step. Several signcryption schemes are proposed throughout the years, each…

Cryptography and Security · Computer Science 2012-03-20 M. Toorani , A. A. Beheshti

DNA has been discussed as a potential medium for data storage. Potentially it could be denser, could consume less energy, and could be more durable than conventional storage media such as hard drives, solid-state storage, and optical media.…

Emerging Technologies · Computer Science 2023-07-04 Arnav Solanki , Zak Griffin , Purab Ranjan Sutradhar , Amlan Ganguly , Marc D. Riedel
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