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Systems of differential equations with polynomial right-hand sides are very common in applications. In particular, when restricted to the positive orthant, they appear naturally (according to the law of mass-action kinetics) in ecology,…

Dynamical Systems · Mathematics 2023-03-06 Gheorghe Craciun , Abhishek Deshpande , Jiaxin Jin

We study self-replicating molecules under externally varying conditions. Changing conditions such as temperature variations and/or alterations in the environment's resource composition lead to both non-constant replication and decay rates…

Biological Physics · Physics 2016-09-08 Claus O. Wilke , Christopher Ronnewinkel , Thomas Martinetz

We revisit the classical population genetics model of a population evolving under multiplicative selection, mutation and drift. The number of beneficial alleles in a multi-locus system can be considered a trait under exponential selection.…

adap-org · Physics 2007-05-23 Magnus Rattray , Jonathan L. Shapiro

In this paper we generalize the Fenichel theory for attracting critical/slow manifolds to fast-reaction systems in infinite dimensions. In particular, we generalize the theory of invariant manifolds for fast-slow partial differential…

Dynamical Systems · Mathematics 2024-03-08 Christian Kuehn , Jan-Eric Sulzbach

Competition between biological species in marine environments is affected by the motion of the surrounding fluid. An effective 2D compressibility can arise, for example, from the convergence and divergence of water masses at the depth at…

Populations and Evolution · Quantitative Biology 2019-01-24 Abigail Plummer , Roberto Benzi , David R. Nelson , Federico Toschi

We study the rheology of a soft particulate system where the inter-particle interactions are weakly attractive. Using extensive molecular dynamics simulations, we scan across a wide range of packing fractions ($\phi$), attraction strengths…

Soft Condensed Matter · Physics 2016-11-30 Ehsan Irani , Pinaki Chaudhuri , Claus Heussinger

For a process U(t,s) acting on a one-parameter family of normed spaces, we present a notion of time-dependent attractor based only on the minimality with respect to the pullback attraction property. Such an attractor is shown to be…

Dynamical Systems · Mathematics 2012-09-27 Monica Conti , Vittorino Pata , Roger Temam

We present a systematic derivation of the gradient flows associated to a broad class of interfacial energies, emphasizing the relation between intrinsic and extrinsic variations of the interface. We show that the intrinsic variables…

Analysis of PDEs · Mathematics 2025-01-28 Vinh Nguyen , Keith Promislow , Brian Wetton

In evolutionary dynamics, a key measure of a mutant trait's success is the probability that it takes over the population given some initial mutant-appearance distribution. This "fixation probability" is difficult to compute in general, as…

Populations and Evolution · Quantitative Biology 2022-02-18 Alex McAvoy , Benjamin Allen

We consider the population dynamics of a set of species whose network of catalytic interactions is described by a directed graph. The relationship between the attractors of this dynamics and the underlying graph theoretic structures like…

adap-org · Physics 2009-10-30 Sanjay Jain , Sandeep Krishna

We undertake a systematic exploration of recurrent patterns in a 1-dimensional Kuramoto-Sivashinsky system. For a small, but already rather turbulent system, the long-time dynamics takes place on a low-dimensional invariant manifold. A set…

Pattern Formation and Solitons · Physics 2009-11-13 Yueheng Lan , Predrag Cvitanovic

A frequently desirable characteristic of chemical kinetics systems is that of persistence, the property that if all the species are initially present then none of them may tend toward extinction. It is known that solutions of…

Dynamical Systems · Mathematics 2014-07-15 Matthew D. Johnston , David Siegel

Evolutionary game dynamics in finite populations is typically subject to noise, inducing effects which are not present in deterministic systems, including fixation and extinction. In the first part of this paper we investigate the…

Populations and Evolution · Quantitative Biology 2010-06-16 Tobias Galla

Systems in which a short-ranged attraction and long-ranged repulsion compete are intrinsically frustrated, leading their structure and dynamics to be dominated either by mesoscopic order or by metastable disorder. Here we report the latter…

Soft Condensed Matter · Physics 2017-12-27 Christian L. Klix , C. Patrick Royall , Hajime Tanaka

The aim of this paper is to study dynamical and topological properties of a flow in the region of influence of an isolated non-saddle set. We see, in particular, that some topological conditions are sufficient to guarantee that these sets…

Dynamical Systems · Mathematics 2020-03-18 Héctor Barge , José M. R. Sanjurjo

In the past years, a remarkable mapping has been found between the dynamics of a population of M individuals undergoing random mutations and selection, and that of a single system in contact with a thermal bath with temperature 1/M. This…

Statistical Mechanics · Physics 2015-07-28 Tommaso Brotto , Guy Bunin , Jorge Kurchan

In subdivided populations, migration acts together with selection and genetic drift and determines their evolution. Building up on a recently proposed method, which hinges on the emergence of a time scale separation between local and global…

Populations and Evolution · Quantitative Biology 2015-03-24 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta

We discuss the feasibility of predicting, managing and subsequently manipulating, the future evolution of a Complex Adaptive System. Our archetypal system mimics a population of adaptive, interacting objects, such as those arising in the…

Physics and Society · Physics 2007-05-23 David M. D. Smith , Neil F. Johnson

We consider a model of socially interacting individuals that make a binary choice in a context of positive additive endogenous externalities. It encompasses as particular cases several models from the sociology and economics literature. We…

Physics and Society · Physics 2007-05-23 Mirta B. Gordon , Jean-Pierre Nadal , Denis Phan , Viktoriya Semeshenko

We discuss the existence of pullback attractors for multivalued dynamical systems on metric spaces. Such attractors are shown to exist without any assumptions in terms of continuity of the solution maps, based only on minimality properties…

Analysis of PDEs · Mathematics 2014-08-13 Michele Coti Zelati , Piotr Kalita
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