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Ontologies present an attractive technology for describing bio-medicine, because they can be shared, and have rich computational properties. However, they lack the rich expressivity of English and fit poorly with the current scientific…

Digital Libraries · Computer Science 2015-12-15 Phillip Lord , Jennifer Warrendar

The maturity of deep learning techniques has led in recent years to a breakthrough in object recognition in visual media. While for some specific benchmarks, neural techniques seem to match if not outperform human judgement, challenges are…

Information Retrieval · Computer Science 2016-06-01 Sanchit Arora , Chuck Cho , Paul Fitzpatrick , Francois Scharffe

Although the annotation paradigm based on Large Language Models (LLMs) has made significant breakthroughs in recent years, its actual deployment still has two core bottlenecks: first, the cost of calling commercial APIs in large-scale…

Computation and Language · Computer Science 2025-06-23 Yao Lu , Zhaiyuan Ji , Jiawei Du , Yu Shanqing , Qi Xuan , Tianyi Zhou

With the rapid adoption of multimodal large language models (MLLMs) across diverse applications, there is a pressing need for task-centered, high-quality training data. A key limitation of current training datasets is their reliance on…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Xiaoyu Lin , Aniket Ghorpade , Hansheng Zhu , Justin Qiu , Dea Rrozhani , Monica Lama , Mick Yang , Zixuan Bian , Ruohan Ren , Alan B. Hong , Jiatao Gu , Chris Callison-Burch

We envision a publish/subscribe ontology system that is able to index millions of user subscriptions and filter them against ontology data that arrive in a streaming fashion. In this work, we propose a SPARQL extension appropriate for a…

Ontology alignment, a critical process in the Semantic Web for detecting relationships between different ontologies, has traditionally focused on identifying so-called "simple" 1-to-1 relationships through class labels and properties…

Artificial Intelligence · Computer Science 2024-07-24 Reihaneh Amini , Sanaz Saki Norouzi , Pascal Hitzler , Reza Amini

Large language models (LLMs) are increasingly applied to open-ended, interpretive annotation tasks, such as thematic analysis by researchers or generating feedback on student work by teachers. These tasks involve free-text annotations…

Computation and Language · Computer Science 2025-09-04 Hyunji Nam , Lucia Langlois , James Malamut , Mei Tan , Dorottya Demszky

Document content extraction is a critical task in computer vision, underpinning the data needs of large language models (LLMs) and retrieval-augmented generation (RAG) systems. Despite recent progress, current document parsing methods have…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Linke Ouyang , Yuan Qu , Hongbin Zhou , Jiawei Zhu , Rui Zhang , Qunshu Lin , Bin Wang , Zhiyuan Zhao , Man Jiang , Xiaomeng Zhao , Jin Shi , Fan Wu , Pei Chu , Minghao Liu , Zhenxiang Li , Chao Xu , Bo Zhang , Botian Shi , Zhongying Tu , Conghui He

High-quality and consistent annotations are fundamental to the successful development of robust machine learning models. Traditional data annotation methods are resource-intensive and inefficient, often leading to a reliance on third-party…

Computer Vision and Pattern Recognition · Computer Science 2024-02-12 Amir Ziai , Aneesh Vartakavi

Despite the large number of patients in Electronic Health Records (EHRs), the subset of usable data for modeling outcomes of specific phenotypes are often imbalanced and of modest size. This can be attributed to the uneven coverage of…

Machine Learning · Computer Science 2021-03-25 Mohamed Ghalwash , Zijun Yao , Prithwish Chakraborty , James Codella , Daby Sow

In ontology-mediated query answering, access to incomplete data sources is mediated by a conceptual layer constituted by an ontology, which can be formulated in a description logic (DL) or using existential rules. In the literature, there…

Logic in Computer Science · Computer Science 2022-08-31 Christian Alrabbaa , Stefan Borgwardt , Patrick Koopmann , Alisa Kovtunova

This paper discloses the potential of OWL (Web Ontology Language) ontologies for generation of rules. The main purpose of this paper is to identify new types of rules, which may be generated from OWL ontologies. Rules, generated from OWL…

Artificial Intelligence · Computer Science 2014-04-21 Olegs Verhodubs

Most application development happens in the context of complex APIs; reference documentation for APIs has grown tremendously in variety, complexity, and volume, and can be difficult to navigate. There is a growing need to develop…

Software Engineering · Computer Science 2016-07-27 Niraj Kumar , Premkumar Devanbu

This paper introduces SignAgent, a novel agentic framework that utilises Large Language Models (LLMs) for scalable, linguistically-grounded Sign Language (SL) annotation and dataset curation. Traditional computational methods for SLs often…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Oliver Cory , Ozge Mercanoglu Sincan , Richard Bowden

Manually annotated data is key to developing text-mining and information-extraction algorithms. However, human annotation requires considerable time, effort and expertise. Given the rapid growth of biomedical literature, it is paramount to…

Human-Computer Interaction · Computer Science 2020-04-27 Rezarta Islamaj , Dongseop Kwon , Sun Kim , Zhiyong Lu

While the general analysis of named entities has received substantial research attention on unstructured as well as structured data, the analysis of relations among named entities has received limited focus. In fact, a review of the…

Computation and Language · Computer Science 2018-10-05 Saeedeh Shekarpour , Faisal Alshargi , Valerie Shalin , Krishnaprasad Thirunarayan , Amit P. Sheth

Understanding large, structured documents like scholarly articles, requests for proposals or business reports is a complex and difficult task. It involves discovering a document's overall purpose and subject(s), understanding the function…

Computation and Language · Computer Science 2018-07-27 Muhammad Mahbubur Rahman , Tim Finin

Microbiology research has access to a very large amount of public information on the habitats of microorganisms. Many areas of microbiology research uses this information, primarily in biodiversity studies. However the habitat information…

Quantitative Methods · Quantitative Biology 2018-11-01 Claire Nédellec , Robert Bossy , Estelle Chaix , Louise Deléger

Recent advancements in audio tokenization have significantly enhanced the integration of audio capabilities into large language models (LLMs). However, audio understanding and generation are often treated as distinct tasks, hindering the…

Most existing sign language translation (SLT) datasets are limited in scale, lack multilingual coverage, and are costly to curate due to their reliance on expert annotation and controlled recording setup. Recently, Vision Language Models…

Computation and Language · Computer Science 2025-10-30 Shakib Yazdani , Yasser Hamidullah , Cristina España-Bonet , Josef van Genabith