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Many of the tools developed for the theory of tree-decompositions of graphs do not work for directed graphs. In this paper we show that some of the most basic tools do work in the case where the model digraph is a directed path. Using these…

Combinatorics · Mathematics 2017-11-03 Joshua Erde

A path in an edge-colored graph is called a proper path if no two adjacent edges of the path receive the same color. For a connected graph $G$, the proper connection number $pc(G)$ of $G$ is defined as the minimum number of colors needed to…

Combinatorics · Mathematics 2016-02-25 Fei Huang , Xueliang Li , Zhongmei Qin , Colton Magnant

We investigate edge-intersection graphs of paths in the plane grid, regarding a parameter called the bend-number. I.e., every vertex is represented by a grid path and two vertices are adjacent if and only if the two grid paths share at…

Combinatorics · Mathematics 2012-08-21 Daniel Heldt , Kolja Knauer , Torsten Ueckerdt

Affordable, high-quality whole-genome assemblies have made it possible to construct rich pangenomes that capture haplotype diversity across many species. As these datasets grow, they motivate the development of specialized techniques…

Genomics · Quantitative Biology 2025-12-19 Gorkem Kadir Solun , Ugur Dogrusoz

We present an $O(nm)$ algorithm for all-pairs shortest paths computations in a directed graph with $n$ nodes, $m$ arcs, and nonnegative integer arc costs. This matches the complexity bound attained by Thorup \cite{Thorup1999} for the…

Data Structures and Algorithms · Computer Science 2022-12-02 James B. Orlin , László A. Végh

The replacement paths problem for directed graphs is to find for given nodes s and t and every edge e on the shortest path between them, the shortest path between s and t which avoids e. For unweighted directed graphs on n vertices, the…

Data Structures and Algorithms · Computer Science 2010-07-15 Virginia Vassilevska Williams

The burning number of a graph was recently introduced by Bonato et al. Although they mention that the burning number generalises naturally to directed graphs, no further research on this has been done. Here, we introduce graph burning for…

Combinatorics · Mathematics 2020-01-13 Remie Janssen

A signed tree model of a graph $G$ is a compact binary structure consisting of a rooted binary tree whose leaves are bijectively mapped to the vertices of $G$, together with 2-colored edges $xy$, called transversal pairs, interpreted as…

Data Structures and Algorithms · Computer Science 2026-02-19 Édouard Bonnet , Colin Geniet , Eun Jung Kim , Sungmin Moon

We study the class of simple graphs $\mathcal{G}^*$ for which every pair of distinct odd cycles intersect in at most one edge. We give a structural characterization of the graphs in $\mathcal{G}^*$ and prove that every $G \in \mathcal{G}^*$…

Combinatorics · Mathematics 2017-11-21 Jessica McDonald , Gregory J. Puleo

The quest for colorful components (connected components where each color is associated with at most one vertex) inside a vertex-colored graph has been widely considered in the last ten years. Here we consider two variants, Minimum Colorful…

Data Structures and Algorithms · Computer Science 2018-06-20 Riccardo Dondi , Florian Sikora

The shortest path problem is among the most fundamental combinatorial optimization problems to answer reachability queries. It is hard to deter-mine which vertices or edges are visited during shortest path traversals. In this paper, we…

Social and Information Networks · Computer Science 2014-12-30 Waqas Nawaz , Kifayat Ullah Khan , Young-Koo Lee

We investigate structural and algorithmic advantages of a directed version of the well-researched class of distance-hereditary graphs. Since the previously defined distance-hereditary digraphs do not permit a recursive structure, we define…

Discrete Mathematics · Computer Science 2021-12-09 Dominique Komander , Carolin Rehs

We consider the Minimum Coverage Kernel problem: given a set $B$ of $d$-dimensional boxes, find a subset of $B$ of minimum size covering the same region as $B$. This problem is $\mathsf{NP}$-hard, but as for many $\mathsf{NP}$-hard problems…

Computational Geometry · Computer Science 2018-05-17 Jérémy Barbay , Pablo Pérez-Lantero , Javiel Rojas-Ledesma

We investigate the tractability of a simple fusion of two fundamental structures on graphs, a spanning tree and a perfect matching. Specifically, we consider the following problem: given an edge-weighted graph, find a minimum-weight…

Data Structures and Algorithms · Computer Science 2024-07-12 Kristóf Bérczi , Tamás Király , Yusuke Kobayashi , Yutaro Yamaguchi , Yu Yokoi

We define a search problem on trees that closely captures the backtracking behavior of all current practical graph isomorphism algorithms. Given two trees with colored leaves, the goal is to find two leaves of matching color, one in each of…

Data Structures and Algorithms · Computer Science 2020-11-04 Markus Anders , Pascal Schweitzer

The families EPT (resp. EPG) Edge Intersection Graphs of Paths in a tree (resp. in a grid) are well studied graph classes. Recently we introduced the graph classes Edge-Intersecting and Non-Splitting Paths in a Tree ENPT, and in a Grid…

Discrete Mathematics · Computer Science 2023-06-22 Arman Boyacı , Tınaz Ekim , Mordechai Shalom , Shmuel Zaks

A pair of complementary algorithms are presented. One of the pair is a fast method for connecting graphs with an edge. The other is a fast method for removing edges from a graph. Both algorithms employ the same tree based graph…

Data Structures and Algorithms · Computer Science 2009-11-13 Michael J. Lee

We investigate the Minimum Eccentricity Shortest Path problem in some structured graph classes. It asks for a given graph to find a shortest path with minimum eccentricity. Although it is NP-hard in general graphs, we demonstrate that a…

Discrete Mathematics · Computer Science 2015-11-17 Feodor F. Dragan , Arne Leitert

A hedge graph is a graph whose edge set has been partitioned into groups called hedges. Here we consider a generalization of the well-known \textsc{Cluster Deletion} problem, named \textsc{Hedge Cluster Deletion}. The task is to compute the…

Data Structures and Algorithms · Computer Science 2025-12-05 Athanasios L. Konstantinidis , Charis Papadopoulos , Georgios Velissaris

A proper Helly circular-arc graph is an intersection graph of a set of arcs on a circle such that none of the arcs properly contains any other arc and every set of pairwise intersecting arcs has a common intersection. The Proper Helly…

Discrete Mathematics · Computer Science 2024-01-09 Akanksha Agrawal , Satyabrata Jana , Abhishek Sahu