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We propose a method to decompose dynamical systems based on the idea that modules constrain the spread of perturbations. We find partitions of system variables that maximize 'perturbation modularity', defined as the autocovariance of…

Physics and Society · Physics 2022-11-22 Artemy Kolchinsky , Alexander J. Gates , Luis M. Rocha

Local periodic perturbations induce frequency-dependent propagation waves in an excitable spatio-temporally chaotic system. We show how segments of noise-contaminated and chaotic perturbations induce characteristic sequences of excitations…

Chaotic Dynamics · Physics 2009-11-10 Gerold Baier , Markus Muller

Biological networks have evolved to be highly functional within uncertain environments while remaining extremely adaptable. One of the main contributors to the robustness and evolvability of biological networks is believed to be their…

Molecular Networks · Quantitative Biology 2008-02-14 Arend Hintze , Christoph Adami

Nonlinear phenomena including multiple equilibria and spontaneous oscillations are common in fluid networks containing either multiple phases or constituent flows. In many systems, such behavior might be attributed to the complicated…

Dynamical Systems · Mathematics 2013-06-26 Nathaniel J. Karst , Brian D. Storey , John B. Geddes

Networks of coupled degrade-and-fire (DF) oscillators are simple dynamical models of assemblies of interacting self-repressing genes. For mean-field interactions, which most mathematical studies have assumed so far, every trajectory must…

Adaptation and Self-Organizing Systems · Physics 2016-05-25 Alex Blumenthal , Bastien Fernandez

The recent investigation into the phenomena of refraction and reflection at temporal boundaries, conducted through the lens of spacetime duality, has attracted considerable scholarly interest. This duality unveils insights into the…

Optics · Physics 2025-03-21 Jing Wang , Yuetao Chen , Shaoyan Gao

We report the occurrence of a self-emerging frequency chimera state in spatially extended systems of coupled oscillators, where the coherence and incoherence are defined with respect to the emergent frequency of the oscillations. This is…

Adaptation and Self-Organizing Systems · Physics 2021-12-28 Sneha Kachhara , G. Ambika

A novel regime of synchronization, called remote synchronization, where the peripheral nodes form a phase synchronized cluster not including the hub, was recently observed in star motifs. We show the existence of a more general dynamical…

Complex network dynamics have been analyzed with models of systems of coupled switches or systems of coupled oscillators. However, many complex systems are composed of components with diverse dynamics whose interactions drive the system's…

Quantitative Methods · Quantitative Biology 2012-01-09 Matthew R. Francis , Elana J. Fertig

Biological phenomena differ significantly from physical phenomena. At the heart of this distinction is the fact that biological entities have computational abilities and thus they are inherently difficult to predict. This is the reason why…

Molecular Networks · Quantitative Biology 2009-09-29 Pau Fernandez , Ricard V. Sole

We demonstrate that strongly asymmetric limit cycles can be observed in the system of three identical ring oscillators (3-gene networks known as Repressilators) globally coupled by signal molecule diffusion added to the model in a way like…

Adaptation and Self-Organizing Systems · Physics 2022-11-18 N. Stankevich , E. Volkov

Complex systems are often modeled as Boolean networks in attempts to capture their logical structure and reveal its dynamical consequences. Approximating the dynamics of continuous variables by discrete values and Boolean logic gates may,…

Molecular Networks · Quantitative Biology 2013-05-29 Johannes Norrell , Joshua E. S. Socolar

Network couplings of oscillatory large-scale systems, such as the brain, have a space-time structure composed of connection strengths and signal transmission delays. We provide a theoretical framework, which allows treating the spatial…

The response of complex networks to perturbations is of utmost importance in areas as diverse as ecosystem management, emergency response, and cell reprogramming. A fundamental property of networks is that the perturbation of one node can…

Molecular Networks · Quantitative Biology 2011-05-20 Sean P. Cornelius , William L. Kath , Adilson E. Motter

We introduce frequency propagation, a learning algorithm for nonlinear physical networks. In a resistive electrical circuit with variable resistors, an activation current is applied at a set of input nodes at one frequency, and an error…

Disordered Systems and Neural Networks · Physics 2022-08-19 Vidyesh Rao Anisetti , A. Kandala , B. Scellier , J. M. Schwarz

The paper discusses fast frequency control in bulk power systems using embedded networks of grid-forming energy storage resources. Differing from their traditional roles of regulating reserves, the storage resources in this work operate as…

Systems and Control · Electrical Eng. & Systems 2024-10-22 Kaustav Chatterjee , Ramij Raja Hossain , Sai Pushpak Nandanoori , Soumya Kundu , Diane Baldwin , Ronald Melton

It is becoming more and more clear that complex networks present remarkable large fluctuations. These fluctuations may manifest differently according to the given model. In this paper we re-consider hidden variable models which turn out to…

Disordered Systems and Neural Networks · Physics 2014-02-19 Massimo Ostilli

We investigate the propagation of perturbations in Boolean networks by evaluating the Derrida plot and modifications of it. We show that even small Random Boolean Networks agree well with the predictions of the annealed approximation, but…

Statistical Mechanics · Physics 2009-05-06 Christoph Fretter , Agnes Szejka , Barbara Drossel

Partially synchronized solitary states occur frequently when a synchronized system of networked oscillators is perturbed locally. Several asymptotic states of different frequencies can coexist at the same node. Here, we reveal the mechanism…

Adaptation and Self-Organizing Systems · Physics 2024-11-25 Jakob Niehues , Serhiy Yanchuk , Rico Berner , Jürgen Kurths , Frank Hellmann , Mehrnaz Anvari

The dynamics of complex-valued fractional-order neuronal networks are investigated, focusing on stability, instability and Hopf bifurcations. Sufficient conditions for the asymptotic stability and instability of a steady state of the…

Dynamical Systems · Mathematics 2017-03-21 Eva Kaslik , Ileana Rodica Radulescu