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Related papers: Mining for adverse drug events with formal concept…

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Estimating causal effects from observational data is inherently challenging due to the lack of observable counterfactual outcomes and even the presence of unmeasured confounding. Traditional methods often rely on restrictive, untestable…

Methodology · Statistics 2025-04-07 Li Chen , Xiaotong Shen , Wei Pan

Automatic monitoring of adverse drug events (ADEs) or reactions (ADRs) is currently receiving significant attention from the biomedical community. In recent years, user-generated data on social media has become a valuable resource for this…

Computation and Language · Computer Science 2023-11-21 Ilseyar Alimova , Elena Tutubalina

We present a new method based on Functional Data Analysis (FDA) for detecting associations between one or more scalar covariates and a longitudinal response, while correcting for other variables. Our methods exploit the temporal structure…

Applications · Statistics 2014-04-30 Matthew Reimherr , Dan Nicolae

Ensuring fairness in anomaly detection models has received much attention recently as many anomaly detection applications involve human beings. However, existing fair anomaly detection approaches mainly focus on association-based fairness…

Machine Learning · Computer Science 2023-03-07 Xiao Han , Lu Zhang , Yongkai Wu , Shuhan Yuan

The use of multiple drugs accounts for almost 30% of all hospital admission and is the 5th leading cause of death in America. Since over 30% of all adverse drug events (ADEs) are thought to be caused by drug-drug interactions (DDI), better…

Quantitative Methods · Quantitative Biology 2020-09-02 Ricky Wang

Visual analytics is a subdomain of data analysis which combines both human and machine analytical abilities and is applied mostly in decision-making and data mining tasks. Triclustering, based on Formal Concept Analysis (FCA), was developed…

Information Retrieval · Computer Science 2015-04-22 Yury Kashnitsky

Graphical models and likelihood ratios can be used by forensic scientists to compare support given by evidence to propositions put forward by competing parties during court proceedings. Such models can also be used to evaluate support for…

Applications · Statistics 2024-04-04 Gail Robertson , Amy L Wilson , Jim Q Smith

Correlated pattern mining has increasingly become an important task in data mining since these patterns allow conveying knowledge about meaningful and surprising relations among data. Frequent correlated patterns were thoroughly studied in…

Databases · Computer Science 2018-10-15 Souad Bouasker

Financial event studies, ubiquitous in finance research, typically use linear factor models with known factors to estimate abnormal returns and identify causal effects of information events. This paper demonstrates that when factor models…

Econometrics · Economics 2025-11-20 Paul Goldsmith-Pinkham , Tianshu Lyu

Data lakes are widely used to store extensive and heterogeneous datasets for advanced analytics. However, the unstructured nature of data in these repositories introduces complexities in exploiting them and extracting meaningful insights.…

Databases · Computer Science 2024-08-27 Anes Bendimerad , Romain Mathonat , Youcef Remil , Mehdi Kaytoue

Despite extensive safety assessments of drugs prior to their introduction to the market, certain adverse drug reactions (ADRs) remain undetected. The primary objective of pharmacovigilance is to identify these ADRs (i.e., signals). In…

Methodology · Statistics 2024-04-23 Louis Dijkstra , Tania Schink , Ronja Foraita

Drug Side-Effects (DSEs) have a high impact on public health, care system costs, and drug discovery processes. Predicting the probability of side-effects, before their occurrence, is fundamental to reduce this impact, in particular on drug…

Quantitative Methods · Quantitative Biology 2022-02-17 Pietro Bongini , Franco Scarselli , Monica Bianchini , Giovanna Maria Dimitri , Niccolò Pancino , Pietro Liò

Drug similarity has been studied to support downstream clinical tasks such as inferring novel properties of drugs (e.g. side effects, indications, interactions) from known properties. The growing availability of new types of drug features…

Machine Learning · Computer Science 2018-05-01 Tengfei Ma , Cao Xiao , Jiayu Zhou , Fei Wang

Event temporal reasoning aims at identifying the temporal relations between two or more events from narratives. However, knowledge conflicts arise when there is a mismatch between the actual temporal relations of events in the context and…

Computation and Language · Computer Science 2024-04-09 Tianqing Fang , Zhaowei Wang , Wenxuan Zhou , Hongming Zhang , Yangqiu Song , Muhao Chen

Canonical Correlation Analysis (CCA) and its regularised versions have been widely used in the neuroimaging community to uncover multivariate associations between two data modalities (e.g., brain imaging and behaviour). However, these…

Machine Learning · Statistics 2021-03-12 Fabio S. Ferreira , Agoston Mihalik , Rick A. Adams , John Ashburner , Janaina Mourao-Miranda

Causal inference quantifies cause-effect relationships by estimating counterfactual parameters from data. This entails using \emph{identification theory} to establish a link between counterfactual parameters of interest and distributions…

Machine Learning · Statistics 2020-04-17 Jaron J. R. Lee , Ilya Shpitser

The pharmaceutical industry is plagued by the problem of side effects that can occur anytime a prescribed medication is ingested. There has been a recent interest in using the vast quantities of medical data available in longitudinal…

Computational Engineering, Finance, and Science · Computer Science 2014-09-22 Jenna Reps , Jonathan M. Garibaldi , Uwe Aickelin , Daniele Soria , Jack E. Gibson , Richard B. Hubbard

Extraction of adverse drug events from biomedical literature and other textual data is an important component to monitor drug-safety and this has attracted attention of many researchers in healthcare. Existing works are more pivoted around…

Computation and Language · Computer Science 2021-10-22 Harshit Jain , Nishant Raj , Suyash Mishra

The vaccine adverse event reporting system (VAERS) is a vital resource for post-licensure vaccine safety monitoring and has played a key role in assessing the safety of COVID-19 vaccines. However it is difficult to properly identify rare…

Methodology · Statistics 2023-06-06 Ali Turfah , Xiaoquan Wen , Lili Zhao

The proximal causal inference framework enables the identification and estimation of causal effects in the presence of unmeasured confounding by leveraging two disjoint sets of observed strong proxies: negative control treatments and…

Methodology · Statistics 2025-12-16 Antonio Olivas-Martinez , Peter B. Gilbert , Andrea Rotnitzky
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