English
Related papers

Related papers: An Overview of Multiple Sequence Alignment Systems

200 papers

Multiscale modeling of material properties has emerged as one of the grand challenges in material science and engineering. We provide a comprehensive, though not exhaustive, overview of the current status of multiscale simulations of…

Materials Science · Physics 2007-05-23 Gang Lu , Efthimios Kaxiras

New developments in the study of multi-meson systems are reviewed. We highlight a new recursive algorithm for generating the requisite contractions needed for studying complex systems of mesons involving large numbers of particles or…

High Energy Physics - Lattice · Physics 2011-01-14 William Detmold , Brian Smigielski

Complex systems are characterized by many interacting units that give rise to emergent behavior. A particularly advantageous way to study these systems is through the analysis of the networks that encode the interactions among the system's…

Physics and Society · Physics 2019-03-21 Alberto Aleta , Yamir Moreno

Model merging has achieved significant success, with numerous innovative methods proposed to enhance capabilities by combining multiple models. However, challenges persist due to the lack of a unified framework for classification and…

Machine Learning · Computer Science 2025-03-13 Wei Ruan , Tianze Yang , Yifan Zhou , Tianming Liu , Jin Lu

A multimodal network encodes relationships between the same set of nodes in multiple settings, and network alignment is a powerful tool for transferring information and insight between a pair of networks. We propose a method for multimodal…

Social and Information Networks · Computer Science 2017-03-31 Huda Nassar , David F. Gleich

The multi-agent system has been a hot topic in the past few decades owing to its lower cost, higher robustness, and higher flexibility. As a particular multi-agent system, the multiple rigid body system received a growing interest for its…

Systems and Control · Electrical Eng. & Systems 2023-08-29 X. Jin , Daniel W. C. Ho , Y. Tang

Much of the research focus on AI alignment seeks to align large language models and other foundation models to the context-less and generic values of helpfulness, harmlessness, and honesty. Frontier model providers also strive to align…

Computers and Society · Computer Science 2025-01-23 Kush R. Varshney , Zahra Ashktorab , Djallel Bouneffouf , Matthew Riemer , Justin D. Weisz

Pyrosequencing is among the emerging sequencing techniques, capable of generating upto 100,000 overlapping reads in a single run. This technique is much faster and cheaper than the existing state of the art sequencing technique such as…

Genomics · Quantitative Biology 2016-09-08 Fahad Saeed , Ashfaq Khokhar , Osvaldo Zagordi , Niko Beerenwinkel

Machine reading comprehension is a challenging task and hot topic in natural language processing. Its goal is to develop systems to answer the questions regarding a given context. In this paper, we present a comprehensive survey on…

Computation and Language · Computer Science 2020-10-22 Razieh Baradaran , Razieh Ghiasi , Hossein Amirkhani

In this paper we address the application of pre-processing techniques to multi-channel time series data with varying lengths, which we refer to as the alignment problem, for downstream machine learning. The misalignment of multi-channel…

AI alignment aims to make AI systems behave in line with human intentions and values. As AI systems grow more capable, so do risks from misalignment. To provide a comprehensive and up-to-date overview of the alignment field, in this survey,…

The recent advances in modelling nonlinear interference of systems operating beyond the C-band are discussed. Estimation accuracy as well as computational complexity of current approaches are compared and addressed.

Signal Processing · Electrical Eng. & Systems 2019-05-08 Daniel Semrau , Robert I. Killey , Polina Bayvel

Sequence comparison is a widely used computational technique in modern molecular biology. In spite of the frequent use of sequence comparisons the important problem of assigning statistical significance to a given degree of similarity is…

Quantitative Methods · Quantitative Biology 2007-05-23 Ralf Bundschuh , Nicholas Chia

Merging Large Language Models (LLMs) is a cost-effective technique for combining multiple expert LLMs into a single versatile model, retaining the expertise of the original ones. However, current approaches often overlook the importance of…

Computation and Language · Computer Science 2024-06-21 Hasan Abed Al Kader Hammoud , Umberto Michieli , Fabio Pizzati , Philip Torr , Adel Bibi , Bernard Ghanem , Mete Ozay

We present SentAlign, an accurate sentence alignment tool designed to handle very large parallel document pairs. Given user-defined parameters, the alignment algorithm evaluates all possible alignment paths in fairly large documents of…

Computation and Language · Computer Science 2023-11-16 Steinþór Steingrímsson , Hrafn Loftsson , Andy Way

This paper presents a new approach to statistical similarity assessment based on sequence alignment. The algorithm performs mutual matching of two random sequences by successively searching for common elements and by applying sequence…

Signal Processing · Electrical Eng. & Systems 2021-06-09 Jakub Nikonowicz , Łukasz Matuszewski , Paweł Kubczak

We investigate the running sums of some well-known automatic sequences to determine whether they are synchronised.

Number Theory · Mathematics 2024-05-29 Rob Burns

Recommender systems are one of the most applied methods in machine learning and find applications in many areas, ranging from economics to the Internet of things. This article provides a general overview of modern approaches to recommender…

Information Retrieval · Computer Science 2021-09-28 Irina Beregovskaya , Mikhail Koroteev

This paper has been withdrawn. With the advancement of statistical theory and computing power, data sets are providing a greater amount of insight into the problems of today. Statisticians have an ever increasing number of tools to attack…

Statistics Theory · Mathematics 2012-12-20 Derek S. Young

LLM Ensemble -- which involves the comprehensive use of multiple large language models (LLMs), each aimed at handling user queries during downstream inference, to benefit from their individual strengths -- has gained substantial attention…