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We introduce two novel evolutionary formulations of the problem of coloring the nodes of a graph. The first formulation is based on the relationship that exists between a graph's chromatic number and its acyclic orientations. It views such…

Neural and Evolutionary Computing · Computer Science 2007-05-23 V. C. Barbosa , C. A. G. Assis , J. O. do Nascimento

We introduce the notion of a network's conduciveness, a probabilistically interpretable measure of how the network's structure allows it to be conducive to roaming agents, in certain conditions, from one portion of the network to another.…

Statistical Mechanics · Physics 2010-07-12 Valmir C. Barbosa

Many real-world phenomena are naturally modeled by graphs and networks. However, classical graph models are often limited to pairwise interactions and may not adequately capture the richer structures that arise in practice. Higher-order…

Social and Information Networks · Computer Science 2026-05-18 Takaaki Fujita , Florentin Smarandache

Encoding facts as representations of entities and binary relationships between them, as learned by knowledge graph representation models, is useful for various tasks, including predicting new facts, question answering, fact checking and…

Machine Learning · Computer Science 2022-02-01 Ivana Balažević

For a graph $G=(V,E),$ a matching $M$ is a set of independent edges. The topic of matchings is well studied in graph theory. In this paper many varieties of matchings are discussed.

Combinatorics · Mathematics 2018-05-10 Todd Fenstermacher , Soumendra Ganguly , Stephen Hedetniemi , Renu Laskar

Graph neural networks have received increased attention over the past years due to their promising ability to handle graph-structured data, which can be found in many real-world problems such as recommended systems and drug synthesis. Most…

Machine Learning · Computer Science 2023-01-27 Xiangyu Wang , Xueming Yan , Yaochu Jin

DP-coloring (also called correspondence coloring) is a generalization of list coloring that has been widely studied in recent years after its introduction by Dvo\v{r}\'{a}k and Postle in 2015. As the analogue of the chromatic polynomial…

In the List $k$-Coloring problem we are given a graph whose every vertex is equipped with a list, which is a subset of $\{1,\ldots,k\}$. We need to decide if $G$ admits a proper coloring, where every vertex receives a color from its list.…

Combinatorics · Mathematics 2025-09-29 Marta Piecyk , Paweł Rzążewski

We extend previous work on injectivity in chemical reaction networks to general interaction networks. Matrix- and graph-theoretic conditions for injectivity of these systems are presented. A particular signed, directed, labelled, bipartite…

Dynamical Systems · Mathematics 2009-10-15 Murad Banaji , Gheorghe Craciun

The main aim of the paper is to study in greater detail absolutely homogeneous structures (that is, objects with the property that each partial isomorphism extends to a global automorphism), with special emphasis on metric spaces and…

General Topology · Mathematics 2023-08-22 Piotr Niemiec

We introduced a methodology to efficiently exploit natural-language expressed biomedical knowledge for repurposing existing drugs towards diseases for which they were not initially intended. Leveraging on developments in Computational…

Quantitative Methods · Quantitative Biology 2014-06-17 Ruggero Gramatica , T. Di Matteo , Stefano Giorgetti , Massimo Barbiani , Dorian Bevec , Tomaso Aste

We associate all small subgraph counting problems with a systematic graph encoding/representation system which makes a coherent use of graphlet structures. The system can serve as a unified foundation for studying and connecting many…

Discrete Mathematics · Computer Science 2021-03-22 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

In this paper we provide a comprehensive introduction to knowledge graphs, which have recently garnered significant attention from both industry and academia in scenarios that require exploiting diverse, dynamic, large-scale collections of…

In the branch of mathematics known as graph theory, graphs are considered as a set of points, called vertices, with connections between these points, called edges. The purpose of this paper is to study mappings between two graphs that have…

Combinatorics · Mathematics 2019-03-19 Jeffrey Beyerl , Cameron Sharpe

A proper vertex coloring of a graph is a mapping of its vertices on a set of colors, such that two adjacent vertices are not mapped to the same color. This constraint may be interpreted in terms of the distance between to vertices and so a…

Combinatorics · Mathematics 2017-11-10 Sebastian Wiederrecht

Consider the collection of edge bicolorings of a graph that is cellularly embedded on an orientable surface. In this work, we count the number of equivalence classes of such colorings under two relations: reversing colors around a face and…

Geometric Topology · Mathematics 2018-02-13 Oliver T. Dasbach , Heather M. Russell

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Causal identification is at the core of the causal inference literature, where complete algorithms have been proposed to identify causal queries of interest. The validity of these algorithms hinges on the restrictive assumption of having…

Machine Learning · Computer Science 2023-10-30 Sina Akbari , Fateme Jamshidi , Ehsan Mokhtarian , Matthew J. Vowels , Jalal Etesami , Negar Kiyavash

We have created a knowledge graph based on major data sources used in ecotoxicological risk assessment. We have applied this knowledge graph to an important task in risk assessment, namely chemical effect prediction. We have evaluated nine…

Artificial Intelligence · Computer Science 2022-03-31 Erik B. Myklebust , Ernesto Jiménez-Ruiz , Jiaoyan Chen , Raoul Wolf , Knut Erik Tollefsen