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We prove a lower and an upper bound on the number of block moves necessary to sort a permutation. We put our results in contrast with existing results on sorting by block transpositions, and raise some open questions.

Combinatorics · Mathematics 2008-06-18 Miklos Bona , Ryan Flynn

In the Strip Packing problem, we are given a vertical strip of fixed width and unbounded height, along with a set of axis-parallel rectangles. The task is to place all rectangles within the strip, without overlaps, while minimizing the…

Data Structures and Algorithms · Computer Science 2025-12-19 Stefan Hougardy , Bart Zondervan

We solve the problem of finding interspersed maximal repeats using a suffix array construction. As it is well known, all the functionality of suffix trees can be handled by suffix arrays, gaining practicality. Our solution improves the…

Data Structures and Algorithms · Computer Science 2013-04-03 Veronica Becher , Alejandro Deymonnaz , Pablo Ariel Heiber

At the end of the 1960s, Knuth characterised the permutations that can be sorted using a stack in terms of forbidden patterns. He also showed that they are in bijection with Dyck paths and thus counted by the Catalan numbers. Subsequently,…

Combinatorics · Mathematics 2025-04-11 Michael Albert , Mireille Bousquet-Mélou

The currently most efficient algorithm for inference with a probabilistic network builds upon a triangulation of a network's graph. In this paper, we show that pre-processing can help in finding good triangulations forprobabilistic…

Artificial Intelligence · Computer Science 2013-01-14 Hans L. Bodlaender , Arie M. C. A. Koster , Frank van den Eijkhof , Linda C. van der Gaag

In this paper, we use Hasse diagrams and generating functions to count alternating permutations with restricted prefix and suffix of lengths 3 and 4. In other words, for an alternating permutation…

Combinatorics · Mathematics 2025-02-18 Ran Pan , Jeffrey Remmel

In the past several years, the problem of genome assembly has received considerable attention from both biologists and computer scientists. An important component of current assembly methods is the scaffolding process. This process involves…

Genomics · Quantitative Biology 2013-07-03 Karl R. B. Schmitt , Aleksey V. Zimin , Guillaume Marcaçs , James A. Yorke , Michelle Girvan

English to Indian language machine translation poses the challenge of structural and morphological divergence. This paper describes English to Indian language statistical machine translation using pre-ordering and suffix separation. The…

Computation and Language · Computer Science 2018-08-03 Raj Nath Patel , Prakash B. Pimpale , M Sasikumar

The input to the token swapping problem is a graph with vertices $v_1, v_2, \ldots, v_n$, and $n$ tokens with labels $1, 2, \ldots, n$, one on each vertex. The goal is to get token $i$ to vertex $v_i$ for all $i= 1, \ldots, n$ using a…

Motivated by a series of applications in data integration, language translation, bioinformatics, and computer vision, we consider spherical regression with two sets of unit-length vectors when the data are corrupted by a small fraction of…

Methodology · Statistics 2019-09-05 Xu Shi , Xiaoou Li , Tianxi Cai

Permutation matrices play a key role in matching and assignment problems across the fields, especially in computer vision and robotics. However, memory for explicitly representing permutation matrices grows quadratically with the size of…

Machine Learning · Computer Science 2023-08-28 Hannah Dröge , Zorah Lähner , Yuval Bahat , Onofre Martorell , Felix Heide , Michael Möller

We study very simple sorting algorithms based on a probabilistic comparator model. In our model, errors in comparing two elements are due to (1) the energy or effort put in the comparison and (2) the difference between the compared…

Data Structures and Algorithms · Computer Science 2018-05-16 Barbara Geissmann , Paolo Penna

Avraham et al. [AFK+15] presented an alternative approach to parametric search, called \emph{bifurcation}, that performs faster under certain circumstances. Intuitively, when the underlying decider execution can be rolled back cheaply and…

Computational Geometry · Computer Science 2025-10-03 Sariel Har-Peled

Post-processing in algorithmic fairness is a versatile approach for correcting bias in ML systems that are already used in production. The main appeal of post-processing is that it avoids expensive retraining. In this work, we propose…

Machine Learning · Statistics 2021-10-27 Felix Petersen , Debarghya Mukherjee , Yuekai Sun , Mikhail Yurochkin

In most social choice settings, the participating agents express their preferences over the different alternatives in the form of linear orderings. While this clearly simplifies preference elicitation, it inevitably leads to poor…

Computer Science and Game Theory · Computer Science 2022-10-05 Georgios Amanatidis , Georgios Birmpas , Aris Filos-Ratsikas , Alexandros A. Voudouris

We study sorting machines consisting of a stack and a pop stack in series, with or without a queue between them. While there are, a priori, four such machines, only two are essentially different: a pop stack followed directly by a stack,…

Combinatorics · Mathematics 2013-03-07 Rebecca Smith , Vincent Vatter

Many parallel algorithms which solve basic problems in computer science use auxiliary space linear in the input to facilitate conflict-free computation. There has been significant work on improving these parallel algorithms to be in-place,…

Data Structures and Algorithms · Computer Science 2025-03-11 Chase Hutton , Adam Melrod

One of the main challenges in Computational Biology is to find the evolutionary distance between two organisms. In the field of comparative genomics, one way to estimate such distance is to find a minimum cost sequence of rearrangements…

Computational Complexity · Computer Science 2022-02-18 Alexsandro Oliveira Alexandrino , Andre Rodrigues Oliveira , Ulisses Dias , Zanoni Dias

The last decade has seen a revolution in the theory and application of machine learning and pattern recognition. Through these advancements, variable ranking has emerged as an active and growing research area and it is now beginning to be…

Computer Vision and Pattern Recognition · Computer Science 2017-06-20 Giorgio Roffo

This paper deals with the following problem: modify a Bayesian network to satisfy a given set of probability constraints by only change its conditional probability tables, and the probability distribution of the resulting network should be…

Artificial Intelligence · Computer Science 2012-07-09 Yun Peng , Zhongli Ding
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