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In this paper, we study the smooth transition from solitons to solitary waves in localization, relation between energy and velocity, propagation and scattering property in the Fermi-Pasta-Ulam lattice analytically and numerically. A soliton…

Pattern Formation and Solitons · Physics 2016-10-03 Zhenying Wen , Jun Tao , Nian Wei

We study the behaviour of interacting self-propelled particles, whose self-propulsion speed decreases with their local density. By combining direct simulations of the microscopic model with an analysis of the hydrodynamic equations obtained…

Statistical Mechanics · Physics 2012-06-25 F. D. C. Farrell , J. Tailleur , D. Marenduzzo , M. C. Marchetti

The stars of the middle main sequence often have spot-like chemical structures at their surfaces. We consider the diffusion process caused by electric currents that can lead to the formation of such chemical spots. Diffusion is considered…

Solar and Stellar Astrophysics · Physics 2016-02-03 Vadim Urpin

Chemotactic bacteria have been observed to congregate into highly regular patterns. When the bacteria are placed in the center of a dish, a wave of bacteria can travel outward, leaving a regular pattern of spots or stripes in its wake.…

Pattern Formation and Solitons · Physics 2009-09-29 William J. Bruno

Motion in a one-dimensional (1D) microfluidic array is simulated. Water droplets, dragged by flowing oil, are arranged in a single row, and due to their hydrodynamic interactions spacing between these droplets oscillates with a wave-like…

Fluid Dynamics · Physics 2015-06-05 Bin Liu , J. Goree , Yan Feng

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

Particles such as microplastics and phytoplankton suspended in the water column in the natural environment are often subject to the action of surface gravity waves. By modelling such anisotropic particles as small spheroids that slowly…

Fluid Dynamics · Physics 2023-08-03 Nimish Pujara , Jean-Luc Thiffeault

We study the formation of spot patterns seen in a variety of bacterial species when the bacteria are subjected to oxidative stress due to hazardous byproducts of respiration. Our approach consists of coupling the cell density field to a…

Intermediate filaments form an essential structural network, spread throughout the cytoplasm and play a key role in cell mechanics, intracellular organization and molecular signaling. The maintenance of the network and its adaptation to the…

Subcellular Processes · Quantitative Biology 2023-06-14 Youngmin Park , Cécile Leduc , Sandrine Etienne-Manneville , Stéphanie Portet

Spiral waves in active media react to small perturbations as particle-like objects. Here we apply the asymptotic theory to the interaction of spiral waves with a localized inhomogeneity, which leads to a novel prediction: drift of the…

Pattern Formation and Solitons · Physics 2010-01-25 V. N. Biktashev , D. Barkley , I. V. Biktasheva

Starting with an experimentally observed networks of actin bundles, we model their network structure in terms of edges and nodes. We then compute and discuss the main electrical parameters, considering the bundles as electrical wires. A set…

Emerging Technologies · Computer Science 2020-05-27 Stefano Siccardi , Andrew Adamatzky Jack Tuszyński , Florian Huber , Jörg Schnauß

Combining experiments and computer simulations, we use a spatially periodic and flashing light-field to direct the motion of phototactic active colloids. Here, the colloids self-organize into a density spike pattern, which resembles a shock…

Soft Condensed Matter · Physics 2019-05-23 Celia Lozano , Benno Liebchen , Borge ten Hagen , Clemens Bechinger , Hartmut Löwen

The acoustofluidic method holds great promise for manipulating microorganisms. When exposed to the steady vortex structures of acoustic streaming flow, these microorganisms exhibit intriguing dynamic behaviors, such as hydrodynamic trapping…

Fluid Dynamics · Physics 2025-04-25 Xuyang Sun , Wenchang Tan , Yi Man

Cell shape changes, essential for processes such as motility or division, are controlled by the actomyosin cortex that actively remodels biological membranes. Their mechanisms can be deciphered in___vitro using biomimetic reconstituted…

Oscillatory dynamics of complex networks has recently attracted great attention. In this paper we study pattern formation in oscillatory complex networks consisting of excitable nodes. We find that there exist a few center nodes and small…

Chaotic Dynamics · Physics 2011-11-23 Liao Xuhong , Xia Qinzhi , Qian Yu , Zhang Lisheng , Hu Gang , Mi Yuanyuan

The advances in understanding complex networks have generated increasing interest in dynamical processes occurring on them. Pattern formation in activator-inhibitor systems has been studied in networks, revealing differences from the…

Adaptation and Self-Organizing Systems · Physics 2015-06-09 Nikos E. Kouvaris , Shigefumi Hata , Albert Díaz-Guilera

This paper introduces the Attracting Random Walks model, which describes the dynamics of a system of particles on a graph with $n$ vertices. At each step, a single particle moves to an adjacent vertex (or stays at the current one) with…

Probability · Mathematics 2020-06-01 Julia Gaudio , Yury Polyanskiy

Four on-lattice and six off-lattice models for active matter are studied numerically, showing that in contact with a wall, they display universal wetting transitions between three distinctive phases. The particles, which interact via…

Statistical Mechanics · Physics 2018-12-05 Néstor Sepúlveda , Rodrigo Soto

We study wave propagation in networks of coupled cells which can behave as excitable or self-oscillatory media. For excitable media, an asymptotic construction of wave trains is presented. This construction predicts their shape and speed,…

Other Condensed Matter · Physics 2009-11-11 A. Carpio

All known realizations of optical wave packets that accelerate along their propagation axis, such as Airy wave packets in dispersive media or wave-front-modulated X-waves, exhibit a constant acceleration; that is, the group velocity varies…

Optics · Physics 2022-02-03 Layton A. Hall , Murat Yessenov , Ayman F. Abouraddy