English
Related papers

Related papers: Coordination motifs and large-scale structural org…

200 papers

The configurational and melting properties of large two-dimensional clusters of charged classical particles interacting with each other via the Coulomb potential are investigated through the Monte Carlo simulation technique. The particles…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Minghui Kong , B. Partoens , F. M. Peeters

Datasets in high-dimension do not typically form clusters in their original space; the issue is worse when the number of points in the dataset is small. We propose a low-computation method to find statistically significant clustering…

Machine Learning · Statistics 2020-08-24 Alden Bradford , Tarun Yellamraju , Mireille Boutin

The thermodynamics and kinetics of crystallization of nanoparticles, as opposed to bulk phases, may be influenced by surface and size effects. We investigate the importance of such factors in the crystallization process of gold, silver, and…

Statistical Mechanics · Physics 2024-07-09 Arthur France-Lanord , Sarath Menon , Julien Lam

Just like atoms combine into molecules, colloids can self-organize into predetermined structures according to a set of design principles. Controlling valence -- the number of inter-particle bonds -- is a prerequisite for the assembly of…

Soft Condensed Matter · Physics 2022-01-05 Angus McMullen , Sascha Hilgenfeldt , Jasna Brujic

We have carried out extensive density functional calculations for series of sodium clusters $Na$$_{N}$ ranging from $N$=10 to 147 and have obtained $\approx$ 13000 distinct isomers. We unravel a number of striking features of the growth…

Materials Science · Physics 2016-09-28 Seyed Mohammad Ghazi , Shahab Zorriasatein , D. G. Kanhere

Nucleonic matter displays a quantum liquid structure, but in some cases finite nuclei behave like molecules composed of clusters of protons and neutrons. Clustering is a recurrent feature in light nuclei, from beryllium to nickel. For…

Nuclear Theory · Physics 2015-06-04 J. -P Ebran , E. Khan , T. Niksic , D. Vretenar

We present three quantum algorithms for clustering graphs based on higher-order patterns, known as motif clustering. One uses a straightforward application of Grover search, the other two make use of quantum approximate counting, and all of…

Quantum Physics · Physics 2023-07-05 Chris Cade , Farrokh Labib , Ido Niesen

Living systems exhibit complex yet organized behavior on multiple spatiotemporal scales. To investigate the nature of multiscale coordination in living systems, one needs a meaningful and systematic way to quantify the complex dynamics, a…

Adaptation and Self-Organizing Systems · Physics 2020-03-11 Mengsen Zhang , William D. Kalies , J. A. Scott Kelso , Emmanuelle Tognoli

Strongly interacting binary mixtures of superparamagnetic colloidal particles confined to a two-dimensional water-air interface are examined by theory, computer simulation and experiment. The mixture exhibits a partial clustering in…

Soft Condensed Matter · Physics 2009-11-11 Norman Hoffmann , Florian Ebert , Christos N. Likos , Hartmut Löwen , Georg Maret

We present in this work a new methodology to design kernels on data which is structured with smaller components, such as text, images or sequences. This methodology is a template procedure which can be applied on most kernels on measures…

Machine Learning · Computer Science 2007-05-23 Marco Cuturi , Kenji Fukumizu

We study gravitational clustering of mass points in three dimensions with random initial positions and periodic boundary conditions (no expansion) by numerical simulations. Correlation properties are well defined in the system and a sort of…

Statistical Mechanics · Physics 2009-11-07 M. Bottaccio , A. Amici , P. Miocchi , R. Capuzzo Dolcetta , M. Montuori , L. Pietronero

Coupled-cluster theory is a powerful tool for first-principles calculations of atomic nuclei, enabling accurate predictions of nuclear observables across the Segr\`e chart. While coupled-cluster computations are especially efficient at…

Nuclear Theory · Physics 2026-04-08 F. Marino , F. Bonaiti , P. Demol , S. Bacca , T. Duguet , G. Hagen , G. R. Jansen , T. Papenbrock , A. Tichai

We introduce the Neural Collaborative Subspace Clustering, a neural model that discovers clusters of data points drawn from a union of low-dimensional subspaces. In contrast to previous attempts, our model runs without the aid of spectral…

Computer Vision and Pattern Recognition · Computer Science 2019-04-25 Tong Zhang , Pan Ji , Mehrtash Harandi , Wenbing Huang , Hongdong Li

Understanding the global organization of complicated and high dimensional data is of primary interest for many branches of applied sciences. It is typically achieved by applying dimensionality reduction techniques mapping the considered…

Computational Geometry · Computer Science 2024-11-11 Paweł Dłotko , Davide Gurnari , Mathis Hallier , Anna Jurek-Loughrey

Clustering analysis identifies samples as groups based on either their mutual closeness or homogeneity. In order to detect clusters in arbitrary shapes, a novel and generic solution based on boundary erosion is proposed. The clusters are…

Computer Vision and Pattern Recognition · Computer Science 2018-04-16 Cheng-Hao Deng , Wan-Lei Zhao

Packing problems, which ask how to arrange a collection of objects in space to meet certain criteria, are important in a great many physical and biological systems, where geometrical arrangements at small scales control behaviour at larger…

Soft Condensed Matter · Physics 2016-05-23 Miranda C. Holmes-Cerfon

A novel nonparametric clustering algorithm is proposed using the interpoint distances between the members of the data to reveal the inherent clustering structure existing in the given set of data, where we apply the classical nonparametric…

Methodology · Statistics 2024-09-02 Soumita Modak

We propose an algorithm for clustering high dimensional data. If $P$ features for $N$ objects are represented in an $N\times P$ matrix ${\bf X}$, where $N\ll P$, the method is based on exploiting the cluster-dependent structure of the…

Machine Learning · Statistics 2018-11-05 Shahina Rahman , Valen E. Johnson

We report numerical investigations of a three-dimensional model of diffusive growth of fine particles, the internal structure of which corresponds to different crystal lattices. A growing cluster (particle) is immersed in, and exchanges…

Statistical Mechanics · Physics 2010-10-12 Vyacheslav Gorshkov , Alexandr Zavalov , Vladimir Privman

The many-body states in an extended Fermionic Molecular Dynamics approach are flexible enough to allow the description of nuclei with shell model nature as well as nuclei with cluster and halo structures. Different many-body configurations…

Nuclear Theory · Physics 2009-11-10 T. Neff , H. Feldmeier