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Folding kinetics of a lattice model of protein is studied. It uses the Random Energy Model for the intrachain couplings and a temperature dependent free energy of solvation derived from a realistic hydration model of apolar solutes. The…

Statistical Mechanics · Physics 2008-11-06 Olivier Collet

We report two phenomena, induced by dynamical correlations, that occur during the free cooling of a two-dimensional mixture of inelastic hard disks. First, we show that, due to the onset of velocity correlations, the ratio of the kinetic…

Statistical Mechanics · Physics 2007-05-23 Ciro Cattuto , Umberto Marini Bettolo Marconi

Velocity and density structure factors are measured over a hydrodynamic range of scales in a horizontal quasi-2d fluidized granular experiment, with packing fractions $\phi\in[10%,40%]$. The fluidization is realized by vertically vibrating…

Soft Condensed Matter · Physics 2015-06-03 A. Puglisi , A. Gnoli , G. Gradenigo , A. Sarracino , D. Villamaina

In galaxy clusters, the hot intracluster medium (ICM) can develop a striking multi-phase structure around the brightest cluster galaxy. Much work has been done on understanding the origin of this central nebula, but less work has studied…

Astrophysics of Galaxies · Physics 2022-12-01 Fred Jennings , Ricarda Beckmann , Debora Sijacki , Yohan Dubois

We consider the problem of gelation in the cluster coagulation model introduced by Norris [\textit{Comm. Math. Phys.}, 209(2):407-435 (2000)], where pairs of clusters of types $(x,y)$ taking values in a measure space $E$, merge to form a…

Probability · Mathematics 2025-08-08 Luisa Andreis , Tejas Iyer , Elena Magnanini

The configurational and melting properties of large two-dimensional clusters of charged classical particles interacting with each other via the Coulomb potential are investigated through the Monte Carlo simulation technique. The particles…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Minghui Kong , B. Partoens , F. M. Peeters

We study the cooperative rupture of multiple adhesion bonds under shared linear loading. Simulations of the appropriate Master equation are compared with numerical integration of a rate equation for the mean number of bonds and its scaling…

Soft Condensed Matter · Physics 2007-05-23 T. Erdmann , U. S. Schwarz

Cooling processes in nature are typically generated by external contact with a cold reservoir or bath. According to the laws of thermodynamics, the final temperature of a system is determined by the temperature of the environment. Here, we…

Soft Condensed Matter · Physics 2025-03-06 Alexander P. Antonov , Marco Musacchio , Hartmut Löwen , Lorenzo Caprini

Injecting a non-dissolvable gas into a saturated liquid results in sub-cooling of the liquid due to forced evaporation into the bubble. Previous studies assumed the rate of evaporation of liquid into the bubble to be independent of the…

Deposits of dipolar particles are investigated by means of extensive Monte Carlo simulations. We found that the effect of the interactions is described by an initial, non-universal, scaling regime characterized by orientationally ordered…

Statistical Mechanics · Physics 2009-11-10 F. de los Santos , J. M. Tavares , M. Tasinkevych , M. M. Telo da Gama

Drying a droplet of colloidal dispersion can result in complex pattern formation due to both development and deformation of a skin at the drop surface. The present study focus on the drying process of droplets of colloidal dispersions in a…

Soft Condensed Matter · Physics 2012-11-08 François Boulogne , Frédérique Giorgiutti-Dauphiné , Ludovic Pauchard

We study the equilibrium behavior of one-dimensional granular clusters and one-particle granular gases for a variety of velocity dependent coefficients of restitution $r$. We obtain equations describing of the long time behavior for the…

Statistical Mechanics · Physics 2009-11-11 E. Thiesen , W. A. M. Morgado

Jamming is a geometric phase transition occurring in dense particle systems in the absence of temperature. We use computer simulations to analyse the effect of thermal fluctuations on several signatures of the transition. We show that…

Statistical Mechanics · Physics 2015-07-16 Atsushi Ikeda , Ludovic Berthier

Heat input roughly balances radiative cooling in the gaseous cores of galaxy clusters even when the central cooling time is short, implying that cooling triggers a feedback loop that maintains thermal balance. Furthermore, cores with short…

Cosmology and Nongalactic Astrophysics · Physics 2015-08-06 Gregory Meece , Brian O'Shea , Mark Voit

By means of molecular dynamics, we study a model system for colloidal suspensions where the interaction is based on a competition between attraction and repulsion. At low temperatures the relaxation time $\tau$ first increases as a power…

Soft Condensed Matter · Physics 2009-11-10 A. de Candia , E. Del Gado , A. Fierro , N. Sator , A. Coniglio

Highly supercooled liquids with soft-core potentials are studied via molecular dynamics simulations in two and three dimensions in quiescent and sheared conditions.We may define bonds between neighboring particle pairs unambiguously owing…

Soft Condensed Matter · Physics 2009-10-31 Ryoichi Yamamoto , Akira Onuki

In this work, the melting phase transitions of $Fe_{n}$ nanoclusters with $10 \leq n \leq 100$ atoms are investigated using classical many-body molecular dynamics simulations. For many cluster sizes, surface melting occurs at much lower…

Atomic and Molecular Clusters · Physics 2025-03-31 Louis E. S. Hoffenberg , Alexander Khrabry , Yuri Barsukov , Igor D. Kaganovich , David B. Graves

In a recent paper [Beige, Knight, and Vitiello, quant-ph/0404160], we showed that a large number N of particles can be cooled very efficiently using a bichromatic interaction. The particles should be excited by red-detuned laser fields…

Quantum Physics · Physics 2007-05-23 Almut Beige , Peter L. Knight , Giuseppe Vitiello

A unifying framework to describe dense flows of dry, deformable grains is proposed. Perturbative analysis of a granular temperature equation describing flows with contact stresses, supported by the recovery of the nonlocal granular fluidity…

Soft Condensed Matter · Physics 2026-01-06 Benjamin M. Alessio , Matthew R. Edwards , Ching-Yao Lai

There is no shortage of energy around to solve the overcooling problem of cooling flow clusters. AGNs, as well as gravitational energy are both energetic enough to balance the cooling of cores of clusters. The challenge is to couple this…

Cosmology and Nongalactic Astrophysics · Physics 2009-10-23 Yuval Birnboim
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