Related papers: Lambda-prophage induction modeled as a cooperative…
Motivated by the recent experiment on the Bose-Einstein condensation of $^{52}$Cr atoms with long-range dipolar interactions (Werner J. et al., Phys. Rev. Lett., 94 (2005) 183201), we consider a system of bosons with repulsive nearest and…
Many biological processes are supported by special molecules, called motor proteins or molecular motors, that transport cellular cargoes along linear protein filaments and can reversibly associate to their tracks. Stimulated by these…
We evaluate the particle current flowing in steady state through a Bose-Einstein condensate subject to a constant force in a quasi-onedimensional lattice and to attractive interactions from fermionic atoms that are localized in various…
We show how the application of a coupling field connecting the two lower metastable states of a Lambda system facilitates stoppage of light in a coheren tly driven Doppler broadened atomic medium via electromagnetic induced transparency
We develop a strong-coupling perturbation theory for the extended Bose-Hubbard model with on-site and nearest-neighbor boson-boson repulsions on ($d > 1$)-dimensional hypercubic lattices. Analytical expressions for the ground-state phase…
As for many motile micro-algae, the freshwater species Chlamydomonas reinhardtii can detect light sources and adapt its motile behavior in response. Here, we show that suspensions of photophobic cells can be unstable to density…
Motivated by a scarcity of simple and analytically tractable models of superconductivity from strong repulsive interactions, we introduce a simple tight-binding lattice model of fermions with repulsive interactions that exhibits…
The cage model for polymer reptation, proposed by Evans and Edwards, and its recent extension to model DNA electrophoresis, are studied by numerically exact computation of the drift velocities for polymers with a length L of up to 15…
Gene regulatory network of lambda phage is one the best studied model systems in molecular biology. More 50 years of experimental study has provided a tremendous amount of data at all levels: physics, chemistry, DNA, protein, and function.…
We study a classical $\Lambda$-type three-level system based on three high-$Q$ micromechanical beam resonators embedded in a gradient electric field. By modulating the strength of the field at the difference frequency between adjacent beam…
The highly tunable nature of synthetic quantum materials -- both in the solid-state and cold atom contexts -- invites examining which microscopic ingredients aid in the realization of correlated phases of matter such as superconductors.…
The cooperative binding of molecular agents onto a substrate is pervasive in living systems. To study whether a system shows cooperativity, one can rely on a fluctuation analysis of quantities such as the number of substrate-bound units and…
We study a synthetic system of motile Escherichia coli bacteria encapsulated inside giant lipid vesicles. Forces exerted by the bacteria on the inner side of the membrane are sufficient to extrude membrane tubes filled with one or several…
The E. coli chemosensory lattice, consisting of receptors, kinases, and adaptor proteins, is an important test case for biochemical signal processing. Kinase output is characterized by precise adaptation to a wide range of background ligand…
We consider propagation of a probe pulse in an atomic medium characterized by a combined tripod and Lambda ($\Lambda$) atom-light coupling scheme. The scheme involves three atomic ground states coupled to two excited states by five light…
An electron injector concept for laser-plasma accelerator was developed in ref [1] and [2] ; it relies on the use of counter-propagating ultrashort laser pulses. In [2], the scheme is as follows: the pump laser pulse generates a large…
We demonstrate that failure of time-invariance assumption in the modeling of electrochemical systems by equivalent circuits can lead to the formation of low frequency "inductive loops" that manifest themselves as positive imaginary parts of…
Numerical simulations are a powerful tool for the development and improvement of Li-ion batteries. Modeling the mass transport of the involved electrolytic solutions requires precise determination of the corresponding electrolyte…
E. coli bacteria swim following a run and tumble pattern. In the run state all flagella join in a single helical bundle that propels the cell body along approximately straight paths. When one or more flagellar motors reverse direction the…
We consider a system of multiple insulating rigid bodies moving inside of an electrically conducting compressible fluid. In this system we take into account the interaction of the fluid with the bodies as well as with the electromagnetic…