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The processes taking place inside the living cell are now understood to the point where predictive computational models can be used to gain detailed understanding of important biological phenomena. A key challenge is to extrapolate this…

Tissues and Organs · Quantitative Biology 2018-10-26 Stefan Engblom Daniel B. Wilson , Ruth E. Baker

This paper discusses the latest generation of the MONARC (MOdels of Networked Analysis at Regional Centers) simulation framework, as a design and modelling tool for large scale distributed systems applied to HEP experiments. A…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-06-28 Ciprian Dobre , Corina Stratan

A method for studying the qualitative dynamical properties of abstract computing machines based on the approximation of their program-size complexity using a general lossless compression algorithm is presented. It is shown that the…

Computational Complexity · Computer Science 2011-01-24 Hector Zenil

The goal of this paper is to show why the framework of communication complexity seems suitable for the study of cellular automata. Researchers have tackled different algorithmic problems ranging from the complexity of predicting to the…

Computational Complexity · Computer Science 2009-06-22 Eric Goles , Pierre-Etienne Meunier , Ivan Rapaport , Guillaume Theyssier

The constituents of a complex system exchange information to function properly. Their signalling dynamics often leads to the appearance of emergent phenomena, such as phase transitions and collective behaviors. While information exchange…

Physics and Society · Physics 2020-11-18 Arsham Ghavasieh , Carlo Nicolini , Manlio De Domenico

In this article, we present an extension of the formulation recently developed by the authors (A Framework for Data-Driven Computational Mechanics Based on Nonlinear Optimization, arXiv:1910.12736 [math.NA]) to the structural dynamics…

Numerical Analysis · Mathematics 2019-12-25 Cristian Guillermo Gebhardt , Marc Christian Steinbach , Dominik Schillinger , Raimund Rolfes

This paper introduces a conceptual, yet quantifiable, architecture framework by extending the notion of system modularity in its broadest sense. Acknowledging that modularity is not a binary feature and comes in various types and levels,…

Systems and Control · Computer Science 2016-08-05 Babak Heydari , Mohsen Mosleh , Kia Dalili

With the growth of data and necessity for distributed optimization methods, solvers that work well on a single machine must be re-designed to leverage distributed computation. Recent work in this area has been limited by focusing heavily on…

Machine Learning · Computer Science 2016-08-04 Chenxin Ma , Jakub Konečný , Martin Jaggi , Virginia Smith , Michael I. Jordan , Peter Richtárik , Martin Takáč

A key issue in the control of distributed discrete systems modeled as Markov decisions processes, is that often the state of the system is not directly observable at any single location in the system. The participants in the control scheme…

Information Theory · Computer Science 2017-05-01 Jie Ren , Solmaz Torabi , John MacLaren Walsh

This paper establishes a general framework for describing hybrid dynamical systems which is particularly suitable for numerical simulation. In this context, the data structures used to describe the sets and functions which comprise the…

chao-dyn · Physics 2008-02-03 Allen Back , John Guckenheimer , Mark Myers

Computing has passed through many transformations since the birth of the first computing machines. Developments in technology have resulted in the availability of fast and inexpensive processors, and progresses in communication technology…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-11-24 Sabu M. Thampi

Composition is an important feature of a specification language, as it enables the design of a complex system in terms of a product of its parts. Decomposition is equally important in order to reason about structural properties of a system.…

Logic in Computer Science · Computer Science 2022-07-05 Benjamin Lion , Farhad Arbab , Carolyn Talcott

Due to the pervasive diffusion of personal mobile and IoT devices, many ``smart environments'' (e.g., smart cities and smart factories) will be, among others, generators of huge amounts of data. Currently, this is typically achieved through…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-28 Lorenzo Valerio , Andrea Passarella , Marco Conti

Complex systems, from the human brain to the global economy, are made of multiple elements that interact in such ways that the behaviour of the `whole' often seems to be more than what is readily explainable in terms of the `sum of the…

Neurons and Cognition · Quantitative Biology 2021-09-28 Pedro A. M. Mediano , Fernando E. Rosas , Andrea I Luppi , Robin L. Carhart-Harris , Daniel Bor , Anil K. Seth , Adam B. Barrett

Computer-based modelling and simulation have become useful tools to facilitate humans to understand systems in different domains, such as physics, astrophysics, chemistry, biology, economics, engineering and social science. A complex system…

Artificial Intelligence · Computer Science 2021-02-03 Xing Su , Yan Kong , Weihua Li

We posit that striving for distributed systems that provide "single system image" semantics is fundamentally flawed and at odds with how systems operate in the physical world. We realize the database as an optimization of this system: a…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-09 Christopher S. Meiklejohn

This proposal presents a graph computing framework intending to support both online and offline computing on large dynamic graphs efficiently. The framework proposes a new data model to support rich evolving vertex and edge data types. It…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-12-08 Zhao Yu Dong

Distributed algorithms have been playing an increasingly important role in many applications such as machine learning, signal processing, and control. Significant research efforts have been devoted to developing and analyzing new algorithms…

Machine Learning · Computer Science 2022-11-03 Xinwei Zhang , Mingyi Hong , Nicola Elia

Unlike computation or the numerical analysis of differential equations, simulation does not have a well established conceptual and mathematical foundation. Simulation is an arguable unique union of modeling and computation. However,…

adap-org · Physics 2008-02-03 Steen Rasmussen , Christopher Barrett

As distributed systems grow in scale and complexity, the need for flexible automation of systems management functions also grows. We outline a framework for building tools that provide distributed, scalable, declarative, modular, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-28 J. Lowell Wofford