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Related papers: Persistent Homology of Complex Networks

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Symmetry -- invariance to certain operators -- is a fundamental concept in many branches of physics. We propose ways to measure symmetric properties of vertices, and their surroundings, in networks. To be stable to the randomness inherent…

Disordered Systems and Neural Networks · Physics 2008-06-29 Petter Holme

The combination of persistent homology and discrete Morse theory has proven very effective in visualizing and analyzing big and heterogeneous data. Indeed, topology provides computable and coarse summaries of data independently from…

Computational Geometry · Computer Science 2021-02-12 Claudia Landi , Sara Scaramuccia

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

Populations and Evolution · Quantitative Biology 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

We discuss and review recent developments in the area of applied algebraic topology, such as persistent homology and barcodes. In particular, we discuss how these are related to understanding more about manifold learning from random point…

Probability · Mathematics 2015-03-13 Robert J. Adler , Omer Bobrowski , Matthew S. Borman , Eliran Subag , Shmuel Weinberger

While branching network structures abound in nature, their objective analysis is more difficult than expected because existing quantitative methods often rely on the subjective judgment of branch structures. This problem is particularly…

Algebraic Topology · Mathematics 2024-02-13 Haruhisa Oda , Mayuko Kida , Yoichi Nakata , Hiroki Kurihara

Computational topologists recently developed a method, called persistent homology to analyze data presented in terms of similarity or dissimilarity. Indeed, persistent homology studies the evolution of topological features in terms of a…

Quantitative Methods · Quantitative Biology 2017-08-01 Pavel Petrov , Stephen T Rush , Zhichun Zhai , Christine H Lee , Peter T Kim , Giseon Heo

The persistent homology of a stationary point process on ${\bf R}^N$ is studied in this paper. As a generalization of continuum percolation theory, we study higher dimensional topological features of the point process such as loops,…

Probability · Mathematics 2016-12-28 Trinh Khanh Duy , Yasuaki Hiraoka , Tomoyuki Shirai

Hypergraph is the most general model for complex networks involving group interactions. Taking the ideas of path homology from Alexander Grigor'yan, Yong Lin, Yuri Muranov and Shing-Tung Yau [18-22], Stephane Bressan, Jingyan Li and the…

Algebraic Topology · Mathematics 2023-01-16 Shiquan Ren , Jie Wu

This study details an approach for the analysis of social media collected political data through the lens of Topological Data Analysis, with a specific focus on Persistent Homology and the political processes they represent by proposing a…

Computers and Society · Computer Science 2024-05-01 Isabela Rocha

For nearly three decades, spatial games have produced a wealth of insights to the study of behavior and its relation to population structure. However, as different rules and factors are added or altered, the dynamics of spatial models often…

Computer Science and Game Theory · Computer Science 2021-09-30 Jakob Stenseke

A crucial step in the analysis of persistent homology is the transformation of data into an appropriate topological object (in our case, a simplicial complex). Modern packages for persistent homology often construct Vietoris--Rips or other…

Computational Geometry · Computer Science 2019-09-18 Michelle Feng , Mason A. Porter

With increasingly ambitious initiatives such as GENI and FIND that seek to design the future Internet, it becomes imperative to define the characteristics of robust topologies, and build future networks optimized for robustness. This paper…

Networking and Internet Architecture · Computer Science 2009-09-25 Ali Sydney , Caterina Scoglio , Mina Youssef , Phillip Schumm

In this paper we study the persistent homology associated with topological crackle generated by distributions with an unbounded support. Persistent homology is a topological and algebraic structure that tracks the creation and destruction…

Probability · Mathematics 2018-10-04 Takashi Owada , Omer Bobrowski

We use the persistent homology method of topological data analysis and dimensional analysis techniques to study data of syntactic structures of world languages. We analyze relations between syntactic parameters in terms of dimensionality,…

Computation and Language · Computer Science 2019-03-14 Alexander Port , Taelin Karidi , Matilde Marcolli

Topologically ordered phases of matter display a number of unique characteristics, including ground states that can be interpreted as patterns of closed strings. In this paper, we consider the problem of detecting and distinguishing closed…

Statistical Mechanics · Physics 2022-09-16 Dan Sehayek , Roger G. Melko

The topology of many real complex networks has been conjectured to be embedded in hidden metric spaces, where distances between nodes encode their likelihood of being connected. Besides of providing a natural geometrical interpretation of…

Physics and Society · Physics 2017-01-23 Antoine Allard , M. Ángeles Serrano , Guillermo García-Pérez , Marián Boguñá

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

Algebraic Topology · Mathematics 2020-04-03 Gunnar Carlsson

Classification of large and dense networks based on topology is very difficult due to the computational challenges of extracting meaningful topological features from real-world networks. In this paper we present a computationally tractable…

Machine Learning · Computer Science 2022-02-04 Tananun Songdechakraiwut , Bryan M. Krause , Matthew I. Banks , Kirill V. Nourski , Barry D. Van Veen

Networked structures arise in a wide array of different contexts such as technological and transportation infrastructures, social phenomena, and biological systems. These highly interconnected systems have recently been the focus of a great…

Statistical Mechanics · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Romualdo Pastor-Satorras , Alessandro Vespignani