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We theoretically investigate the kinetics of the folding transition of a single semiflexible polymer. In the folding transition, the growth rate decrease with an increase in the number of monomers in a collapsed domain, suggesting that the…

Soft Condensed Matter · Physics 2009-11-13 Natsuhiko Yoshinaga

This thesis investigates critical phenomena and equilibrium states in various stochastic models through three interconnected studies. In the first chapter, we analyze the Activated Random Walk model on a one-dimensional ring in the…

Probability · Mathematics 2024-12-24 Célio Terra

We present a continuum level analytical model of a droplet of active contractile fluid consisting of filaments and motors. We calculate the steady state flows that result from a splayed polarisation of the filaments. We account for the…

Cell Behavior · Quantitative Biology 2014-02-20 Carl A. Whitfield , Davide Marenduzzo , Raphaël Voituriez , Rhoda J. Hawkins

We study general aspects of active motion with fluctuations in the speed and the direction of motion in two dimensions. We consider the case in which fluctuations in the speed are not correlated to fluctuations in the direction of motion,…

Biological Physics · Physics 2009-11-13 Fernando Peruani , Luis G. Morelli

The density crossover scaling of various thermodynamic properties of solutions and melts of self-avoiding and highly flexible polymer chains without chain intersections confined to strictly two dimensions is investigated by means of…

Soft Condensed Matter · Physics 2012-09-03 N. Schulmann , H. Meyer , P. Polińska , J. Baschnagel , J. P. Wittmer

Hybrid molecular dynamics/Monte Carlo simulations used to study melts of unentangled, thermoreversibly associating supramolecular polymers. In this first of a series of papers, we describe and validate a model that is effective in…

Soft Condensed Matter · Physics 2015-05-13 Robert S. Hoy , Glenn H. Fredrickson

We study the phase behavior of single homopolymers in a simple hydrophobic/hydrophilic off-lattice model with sequence independent local interactions. The specific heat is, not unexpectedly, found to exhibit a pronounced peak well below the…

Soft Condensed Matter · Physics 2009-10-31 Anders Irbäck , Erik Sandelin

Using molecular dynamics simulations, we study supercritical fluids near the gas-liquid critical point under heat flow in two dimensions. We calculate the steady-state temperature and density profiles. The resultant thermal conductivity…

Statistical Mechanics · Physics 2009-11-10 Toshiyuki Hamanaka , Ryoichi Yamamoto , Akira Onuki

Within self-consistent field theory we study the phase behavior of a symmetrical binary AB polymer blend confined into a thin film. The film surfaces interact with the monomers via short range potentials. One surface attracts the A…

Statistical Mechanics · Physics 2007-05-23 M. Mueller , K. Binder , E. V. Albano

We analyze structural and conformational properties in a simulated bead-spring model of a non-entangled, supercooled polymer melt. We explore the statics of the model via various structure factors, involving not only the monomers, but also…

Soft Condensed Matter · Physics 2009-11-10 Martin Aichele , Song-Ho Chong , Jörg Baschnagel , Matthias Fuchs

We have studied the collective phenomena of multicomponent glasses at ultra low temperatures [Strehlow, et. al, Phys. Rev. Lett 80, 5361 (1998)] by taking into account the proper interaction between tunneling centers. We have considered…

Disordered Systems and Neural Networks · Physics 2009-11-07 A. Langari

Half-space directed polymers in random environments are models of interface growth in the presence of an attractive hard wall. They arise naturally in the study of wetting and entropic repulsion phenomena. In 1985, Kardar predicted a…

Probability · Mathematics 2024-10-22 Victor Ginsburg

We study the geometry of a semiflexible polymer at finite temperatures. The writhe can be calculated from the properties of Gaussian random walks on the sphere. We calculate static and dynamic writhe correlation functions. The writhe of a…

Soft Condensed Matter · Physics 2009-10-31 A. C. Maggs

The some dynamic properties of a random heteropolymer in the condensed state are studied in the mode coupling approximation. In agreement with recent report a dynamic friction increasing is predicted for the random heteropolymer with…

Disordered Systems and Neural Networks · Physics 2007-05-23 E. Sh. Mamasakhlisov , V. F. Morozov

The scaling behavior of the thermoelectric transport properties in disordered systems is studied in the energy region near the metal-insulator transition. Using an energy-dependent conductivity $\sigma$ obtained experimentally, we extend…

Disordered Systems and Neural Networks · Physics 2007-05-23 C. Villagonzalo , R. A. Roemer , M. Schreiber , A. MacKinnon

The directed polymer in a 1+3 dimensional random medium is known to present a disorder-induced phase transition. For a polymer of length $L$, the high temperature phase is characterized by a diffusive behavior for the end-point displacement…

Disordered Systems and Neural Networks · Physics 2007-05-23 Cecile Monthus , Thomas Garel

Long linear polymers in a depinned interfaces environment have been studied for a long time, for instance in \cite{Caravenna2009depinning} when the temperature is constant. In this paper, we study an extension of this model by making the…

Probability · Mathematics 2024-10-10 Angot Elric

In theoretical analyses of the moving contact line, an infinite force along the solid wall has been reported based off the non-integrable stress along a single interface. In this investigation we demonstrate that the stress singularity is…

Fluid Dynamics · Physics 2018-11-20 Peter Zhang , Kamran Mohseni

In this article, I study the localization transition of an hydrophobic homopolymer in interaction with an interface between oil and water. To that aim I consider a model in which the trajectories of a simple random walk play the role of the…

Probability · Mathematics 2016-08-16 Nicolas Pétrélis

A diathermal wall between two heat baths at different temperatures can be mimicked by a layer of independent spin pairs with some internal energy and where each spin $\sigma_a$ is flipped by thermostat $a$ ($a=1,2$). The transition rates…

Statistical Mechanics · Physics 2015-05-06 Françoise Cornu , Michel Bauer